Gm28434 Gene Detail

Summary

• Symbol
  Gm28434
• Name
  predicted gene 28434

• Feature Type
  protein coding gene
• IDs
  MGI:5579140
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:88117376-88156136 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  1220 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579140	protein coding gene	Chr5:88117376-88156136 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0029697	protein coding gene	Chr5:88948504-88987696 (+)
A/J	MGP_AJ_G0029664	protein coding gene	Chr5:85317295-85356310 (+)
AKR/J	MGP_AKRJ_G0029610	protein coding gene	Chr5:88140103-88178883 (+)
BALB/cJ	MGP_BALBcJ_G0029673	protein coding gene	Chr5:86238409-86277714 (+)
C3H/HeJ	MGP_C3HHeJ_G0029396	protein coding gene	Chr5:88536362-88576729 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0030128	protein coding gene	Chr5:92593769-92638048 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0027366	protein coding gene	Chr5:80913602-80961082 (+)
CAST/EiJ	MGP_CASTEiJ_G0028806	protein coding gene	Chr5:87941709-87991514 (+)
CBA/J	MGP_CBAJ_G0029365	protein coding gene	Chr5:95527185-95567151 (+)
DBA/2J	MGP_DBA2J_G0029510	protein coding gene	Chr5:85484450-85526742 (+)
FVB/NJ	MGP_FVBNJ_G0029470	protein coding gene	Chr5:84392664-84431411 (+)
LP/J	MGP_LPJ_G0029598	protein coding gene	Chr5:89357425-89396080 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0029499	protein coding gene	Chr5:100651196-100707628 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0030161	protein coding gene	Chr5:87705858-87743998 (+)
PWK/PhJ	MGP_PWKPhJ_G0028525	protein coding gene	Chr5:84482282-84525976 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0028885	protein coding gene	Chr5:88097903-88138732 (+)

Homology

• Gene Tree
  Gm28434
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  2
• Radiation induced
  1
• Spontaneous
  1
• Genomic Mutations
  4 involving Gm28434
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• UniProt
  1

• Ensembl
  ENSMUSG00000100704 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100704	Ensembl Gene Model | MGI Sequence Detail	38761	C57BL/6J
transcript	ENSMUST00000187738	Ensembl | MGI Sequence Detail	500	Not Applicable
polypeptide	ENSMUSP00000139916	Ensembl | MGI Sequence Detail	46	Not Applicable

Protein
Information

• UniProt
  1 Sequence

References

• Summaries
  All 9

  Phenotypes 6
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17