Gm28441 Gene Detail

Summary

• Symbol
  Gm28441
• Name
  predicted gene 28441

• Feature Type
  lncRNA gene
• IDs
  MGI:5579147
  NCBI Gene: 102633688
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:133762927-133766110 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  214 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579147	lncRNA gene	Chr1:133762927-133766110 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004970	lincRNA gene	Chr1:137462821-137466916 (+)
A/J	MGP_AJ_G0004952	lincRNA gene	Chr1:132297580-132300726 (+)
AKR/J	MGP_AKRJ_G0004929	lincRNA gene	Chr1:136238161-136243252 (+)
BALB/cJ	MGP_BALBcJ_G0004933	lincRNA gene	Chr1:132629750-132633091 (+)
C3H/HeJ	MGP_C3HHeJ_G0004882	lincRNA gene	Chr1:136336683-136339882 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005083	lincRNA gene	Chr1:142481965-142485116 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004499	lincRNA gene	Chr1:125443344-125445808 (+)
CAST/EiJ	MGP_CASTEiJ_G0004831	lincRNA gene	Chr1:135379872-135385409 (+)
CBA/J	MGP_CBAJ_G0004873	lincRNA gene	Chr1:147377241-147380804 (+)
DBA/2J	MGP_DBA2J_G0004893	lincRNA gene	Chr1:131312763-131316427 (+)
FVB/NJ	MGP_FVBNJ_G0004912	lincRNA gene	Chr1:129934965-129938355 (+)
LP/J	MGP_LPJ_G0004970	lincRNA gene	Chr1:138729549-138733836 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004897	lincRNA gene	Chr1:153123736-153128308 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005088	lincRNA gene	Chr1:135962016-135965128 (+)
PWK/PhJ	MGP_PWKPhJ_G0004783	lincRNA gene	Chr1:130319150-130322712 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004708	lincRNA gene	Chr1:134928368-134930022 (+)
WSB/EiJ	MGP_WSBEiJ_G0004878	lincRNA gene	Chr1:135983449-135987620 (+)

Homology

• Gene Tree
  Gm28441
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm28441
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000100830 (Evidence)
• NCBI Gene
  102633688

Representative Sequences			Length	Strain/Species
genomic	102633688	NCBI Gene Model | MGI Sequence Detail	3184	C57BL/6J
transcript	AK132987	GenBank | ENA | DDBJ | MGI Sequence Detail	1345	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45