Gm28447 Gene Detail

Summary

• Symbol
  Gm28447
• Name
  predicted gene 28447

• Feature Type
  lncRNA gene
• IDs
  MGI:5579153
  NCBI Gene: 105245186
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:61421172-61446853 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic

Strain
Comparison

• SNPs within 2kb
  809 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579153	lncRNA gene	Chr10:61421172-61446853 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0015136	unclassified non-coding RNA gene	Chr10:60943646-60969018 (-)
A/J	MGP_AJ_G0015110	unclassified non-coding RNA gene	Chr10:59113156-59138853 (-)
AKR/J	MGP_AKRJ_G0015073	unclassified non-coding RNA gene	Chr10:60657201-60684695 (-)
BALB/cJ	MGP_BALBcJ_G0015073	unclassified non-coding RNA gene	Chr10:59189034-59214572 (-)
C3H/HeJ	MGP_C3HHeJ_G0014896	unclassified non-coding RNA gene	Chr10:60560116-60585786 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015529	unclassified non-coding RNA gene	Chr10:63124144-63152822 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013275	unclassified non-coding RNA gene	Chr10:56080549-56112293 (-)
CAST/EiJ	MGP_CASTEiJ_G0014450	unclassified non-coding RNA gene	Chr10:60562920-60592340 (-)
CBA/J	MGP_CBAJ_G0014875	unclassified non-coding RNA gene	Chr10:65481889-65519021 (-)
DBA/2J	MGP_DBA2J_G0014968	unclassified non-coding RNA gene	Chr10:58384366-58409886 (-)
FVB/NJ	MGP_FVBNJ_G0014979	unclassified non-coding RNA gene	Chr10:57636672-57662052 (-)
LP/J	MGP_LPJ_G0015050	unclassified non-coding RNA gene	Chr10:61339346-61365111 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015006	unclassified non-coding RNA gene	Chr10:67779810-67808894 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015568	unclassified non-coding RNA gene	Chr10:60473956-60502331 (-)
PWK/PhJ	MGP_PWKPhJ_G0014242	unclassified non-coding RNA gene	Chr10:58223168-58254539 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0014030	unclassified non-coding RNA gene	Chr10:59826240-59854825 (-)
WSB/EiJ	MGP_WSBEiJ_G0014553	unclassified non-coding RNA gene	Chr10:60387850-60417640 (-)

Homology

• Gene Tree
  Gm28447
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm28447
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000101792 (Evidence)
• NCBI Gene
  105245186

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101792	Ensembl Gene Model | MGI Sequence Detail	25682	C57BL/6J
transcript	ENSMUST00000186677	Ensembl | MGI Sequence Detail	2230	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 10

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87