Gm28515 Gene Detail

Summary

• Symbol
  Gm28515
• Name
  predicted gene 28515

• Feature Type
  lncRNA gene
• IDs
  MGI:5579221
  NCBI Gene: 102640577
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:92634193-92639694 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic

Strain
Comparison

• SNPs within 2kb
  237 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579221	lncRNA gene	Chr8:92634193-92639694 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0007365	lincRNA gene	Chr8:93173739-93179234 (-)
A/J	MGP_AJ_G0007362	lincRNA gene	Chr8:89506081-89511582 (-)
AKR/J	MGP_AKRJ_G0007334	lincRNA gene	Chr8:92034751-92040246 (-)
BALB/cJ	MGP_BALBcJ_G0007340	lincRNA gene	Chr8:89669635-89675133 (-)
C3H/HeJ	MGP_C3HHeJ_G0007284	lincRNA gene	Chr8:92728789-92734290 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0007511	lincRNA gene	Chr8:96612964-96618465 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006704	lincRNA gene	Chr8:83449253-83454747 (-)
CAST/EiJ	MGP_CASTEiJ_G0007186	lincRNA gene	Chr8:92257752-92263240 (-)
CBA/J	MGP_CBAJ_G0007266	lincRNA gene	Chr8:99828481-99833978 (-)
DBA/2J	MGP_DBA2J_G0007289	lincRNA gene	Chr8:89057018-89062515 (-)
FVB/NJ	MGP_FVBNJ_G0007310	lincRNA gene	Chr8:87989542-87995040 (-)
LP/J	MGP_LPJ_G0007370	lincRNA gene	Chr8:93301446-93306941 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007286	lincRNA gene	Chr8:102252589-102258088 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007513	lincRNA gene	Chr8:92137582-92143080 (-)
PWK/PhJ	MGP_PWKPhJ_G0007127	lincRNA gene	Chr8:88390416-88395913 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0007035	lincRNA gene	Chr8:91003751-91009270 (-)
WSB/EiJ	MGP_WSBEiJ_G0007246	lincRNA gene	Chr8:92591091-92596587 (-)

Homology

• Gene Tree
  Gm28515
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000099812 (Evidence)
• NCBI Gene
  102640577

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099812	Ensembl Gene Model | MGI Sequence Detail	5502	C57BL/6J
transcript	ENSMUST00000189823	Ensembl | MGI Sequence Detail	2530	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;