Gm28693 Pseudogene Detail

Summary

• Symbol
  Gm28693
• Name
  predicted gene 28693

• Feature Type
  pseudogene
• IDs
  MGI:5579399
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:156663179-156663509 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  103 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579399	pseudogene	Chr1:156663179-156663509 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039644	pseudogene	Chr1:161816812-161819441 (-)
A/J	MGP_AJ_G0039643	pseudogene	Chr1:155309881-155312354 (-)
AKR/J	MGP_AKRJ_G0039568	pseudogene	Chr1:160049189-160051662 (-)
BALB/cJ	MGP_BALBcJ_G0039616	pseudogene	Chr1:155804819-155807292 (-)
C3H/HeJ	MGP_C3HHeJ_G0039279	pseudogene	Chr1:160185125-160187598 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040171	pseudogene	Chr1:167360996-167363633 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036815	pseudogene	Chr1:147502088-147504744 (-)
CAST/EiJ	MGP_CASTEiJ_G0038398	pseudogene	Chr1:159733774-159736407 (-)
CBA/J	MGP_CBAJ_G0039248	pseudogene	Chr1:173285257-173287730 (-)
DBA/2J	MGP_DBA2J_G0039441	pseudogene	Chr1:154254330-154256803 (-)
FVB/NJ	MGP_FVBNJ_G0039397	pseudogene	Chr1:152715693-152718166 (-)
LP/J	MGP_LPJ_G0039484	pseudogene	Chr1:162940023-162942655 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039399	pseudogene	Chr1:180788007-180790649 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040274	pseudogene	Chr1:159871810-159874283 (-)
PWK/PhJ	MGP_PWKPhJ_G0038075	pseudogene	Chr1:153353574-153356038 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0037824	pseudogene	Chr1:158611337-158613893 (-)
WSB/EiJ	MGP_WSBEiJ_G0038633	pseudogene	Chr1:159971773-159974405 (-)

Homology

• Gene Tree
  Gm28693
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm28693
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000101964 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101964	Ensembl Gene Model | MGI Sequence Detail	331	C57BL/6J
transcript	ENSMUST00000190758	Ensembl | MGI Sequence Detail	331	Not Applicable

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;