Gm28719 Gene Detail

Summary

• Symbol
  Gm28719
• Name
  predicted gene 28719

• Feature Type
  lincRNA gene
• IDs
  MGI:5579425
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:86475763-86477519 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic

Strain
Comparison

• SNPs within 2kb
  134 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579425	lincRNA gene	Chr6:86475763-86477519 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001984	unclassified gene	Chr6:87790530-87792267 (+)
A/J	MGP_AJ_G0001960	unclassified gene	Chr6:84402829-84404566 (+)
AKR/J	MGP_AKRJ_G0001948	unclassified gene	Chr6:86848053-86849805 (+)
BALB/cJ	MGP_BALBcJ_G0001957	unclassified gene	Chr6:84415228-84416980 (+)
C3H/HeJ	MGP_C3HHeJ_G0001968	unclassified gene	Chr6:97618383-97620120 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0002079	unclassified gene	Chr6:90173324-90175076 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001730	unclassified gene	Chr6:82578174-82579883 (+)
CAST/EiJ	MGP_CASTEiJ_G0001901	unclassified gene	Chr6:86915778-86917528 (+)
CBA/J	MGP_CBAJ_G0001928	unclassified gene	Chr6:93720462-93722199 (+)
DBA/2J	MGP_DBA2J_G0001932	unclassified gene	Chr6:83719197-83720934 (+)
FVB/NJ	MGP_FVBNJ_G0001940	unclassified gene	Chr6:82902187-82903924 (+)
LP/J	MGP_LPJ_G0001986	unclassified gene	Chr6:87830179-87831916 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001917	unclassified gene	Chr6:97841131-97842868 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002068	unclassified gene	Chr6:86686353-86688094 (+)
PWK/PhJ	MGP_PWKPhJ_G0001865	unclassified gene	Chr6:82661461-82663200 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001827	unclassified gene	Chr6:85524839-85526472 (+)
WSB/EiJ	MGP_WSBEiJ_G0001927	unclassified gene	Chr6:87142355-87144103 (+)

Homology

• Gene Tree
  Gm28719
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  10
• Gene trapped
  9
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm28719
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000100174 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100174	Ensembl Gene Model | MGI Sequence Detail	1757	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 6
• Earliest
  J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
• Latest
  J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)