Gm28720 Gene Detail

Summary

• Symbol
  Gm28720
• Name
  predicted gene 28720

• Feature Type
  lincRNA gene
• IDs
  MGI:5579426
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:86471631-86474786 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic

Strain
Comparison

• SNPs within 2kb
  172 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579426	lincRNA gene	Chr6:86471631-86474786 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001983	unclassified gene	Chr6:87786381-87789546 (+)
A/J	MGP_AJ_G0001959	unclassified gene	Chr6:84398682-84401845 (+)
AKR/J	MGP_AKRJ_G0001947	unclassified gene	Chr6:86843971-86847076 (+)
BALB/cJ	MGP_BALBcJ_G0001956	unclassified gene	Chr6:84411146-84414251 (+)
C3H/HeJ	MGP_C3HHeJ_G0001969	unclassified gene	Chr6:97621104-97624330 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0002078	unclassified gene	Chr6:90169364-90172347 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0001900	unclassified gene	Chr6:86911810-86914810 (+)
CBA/J	MGP_CBAJ_G0001927	unclassified gene	Chr6:93716313-93719478 (+)
DBA/2J	MGP_DBA2J_G0001931	unclassified gene	Chr6:83715048-83718213 (+)
FVB/NJ	MGP_FVBNJ_G0001939	unclassified gene	Chr6:82898238-82901203 (+)
LP/J	MGP_LPJ_G0001985	unclassified gene	Chr6:87826178-87829195 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001916	unclassified gene	Chr6:97836985-97840147 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002067	unclassified gene	Chr6:86682216-86685369 (+)
PWK/PhJ	MGP_PWKPhJ_G0001864	unclassified gene	Chr6:82657467-82660474 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001826	unclassified gene	Chr6:85521114-85523918 (+)
WSB/EiJ	MGP_WSBEiJ_G0001926	unclassified gene	Chr6:87138383-87141378 (+)

Homology

• Gene Tree
  Gm28720
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  4
• Gene trapped
  3
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm28720
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000101210 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101210	Ensembl Gene Model | MGI Sequence Detail	3156	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 6
• Earliest
  J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
• Latest
  J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)