Gm28750 Gene Detail

Summary

• Symbol
  Gm28750
• Name
  predicted gene 28750

• Feature Type
  lncRNA gene
• IDs
  MGI:5579456
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:41233528-41251454 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic

Strain
Comparison

• SNPs within 2kb
  513 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579456	lncRNA gene	Chr16:41233528-41251454 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003349	antisense lncRNA gene	Chr16:40054341-40073013 (-)
A/J	MGP_AJ_G0003325	antisense lncRNA gene	Chr16:38185714-38204931 (-)
AKR/J	MGP_AKRJ_G0003308	antisense lncRNA gene	Chr16:39530250-39548097 (-)
BALB/cJ	MGP_BALBcJ_G0003314	antisense lncRNA gene	Chr16:38206125-38228222 (-)
C3H/HeJ	MGP_C3HHeJ_G0003267	antisense lncRNA gene	Chr16:39633500-39654028 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003455	antisense lncRNA gene	Chr16:40978952-41001725 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002973	antisense lncRNA gene	Chr16:38375315-38393566 (-)
CAST/EiJ	MGP_CASTEiJ_G0003231	antisense lncRNA gene	Chr16:39822039-39841998 (-)
CBA/J	MGP_CBAJ_G0003264	antisense lncRNA gene	Chr16:42709992-42731601 (-)
DBA/2J	MGP_DBA2J_G0003269	antisense lncRNA gene	Chr16:37966096-37983914 (-)
FVB/NJ	MGP_FVBNJ_G0003288	antisense lncRNA gene	Chr16:37955618-37973453 (-)
LP/J	MGP_LPJ_G0003342	antisense lncRNA gene	Chr16:39721024-39739925 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003277	antisense lncRNA gene	Chr16:42054554-42082889 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003458	antisense lncRNA gene	Chr16:39479789-39499464 (-)
PWK/PhJ	MGP_PWKPhJ_G0003191	antisense lncRNA gene	Chr16:38358699-38377185 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0003134	antisense lncRNA gene	Chr16:39382605-39401890 (-)
WSB/EiJ	MGP_WSBEiJ_G0003265	antisense lncRNA gene	Chr16:39569236-39589113 (-)

Homology

• Gene Tree
  Gm28750
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000101463 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101463	Ensembl Gene Model | MGI Sequence Detail	17927	C57BL/6J
transcript	ENSMUST00000186327	Ensembl | MGI Sequence Detail	658	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;