Gm28821 Gene Detail

Summary

• Symbol
  Gm28821
• Name
  predicted gene 28821

• Feature Type
  lncRNA gene
• IDs
  MGI:5579527
  NCBI Gene: 115486482
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:142688768-142694345 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  243 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579527	lncRNA gene	Chr7:142688731-142694356 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0004524	antisense lncRNA gene	Chr7:148417182-148422759 (-)
A/J	MGP_AJ_G0004504	antisense lncRNA gene	Chr7:144117053-144122630 (-)
AKR/J	MGP_AKRJ_G0004487	antisense lncRNA gene	Chr7:148168107-148173684 (-)
BALB/cJ	MGP_BALBcJ_G0004489	antisense lncRNA gene	Chr7:143893348-143898925 (-)
C3H/HeJ	MGP_C3HHeJ_G0004438	antisense lncRNA gene	Chr7:147930123-147935700 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004639	antisense lncRNA gene	Chr7:153779658-153785235 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004093	antisense lncRNA gene	Chr7:145331656-145337436 (-)
CAST/EiJ	MGP_CASTEiJ_G0004398	antisense lncRNA gene	Chr7:140233607-140239201 (-)
CBA/J	MGP_CBAJ_G0004433	antisense lncRNA gene	Chr7:159039252-159044829 (-)
DBA/2J	MGP_DBA2J_G0004447	antisense lncRNA gene	Chr7:142091425-142097002 (-)
FVB/NJ	MGP_FVBNJ_G0004464	antisense lncRNA gene	Chr7:142011937-142017514 (-)
LP/J	MGP_LPJ_G0004528	antisense lncRNA gene	Chr7:149934721-149940298 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004453	antisense lncRNA gene	Chr7:159634625-159640202 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004638	antisense lncRNA gene	Chr7:147132223-147137800 (-)
PWK/PhJ	MGP_PWKPhJ_G0004351	antisense lncRNA gene	Chr7:135395981-135402070 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0004292	antisense lncRNA gene	Chr7:133936866-133943162 (-)
WSB/EiJ	MGP_WSBEiJ_G0004437	antisense lncRNA gene	Chr7:148134376-148139953 (-)

Homology

• Gene Tree
  Gm28821
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2

• Ensembl
  ENSMUSG00000101062 (Evidence)
• NCBI Gene
  115486482

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101062	Ensembl Gene Model | MGI Sequence Detail	5578	C57BL/6J
transcript	ENSMUST00000185637	Ensembl | MGI Sequence Detail	610	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;