Gm28892 Gene Detail

Summary

• Symbol
  Gm28892
• Name
  predicted gene 28892

• Feature Type
  lncRNA gene
• IDs
  MGI:5579598
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:134761880-134774153 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  402 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579598	lncRNA gene	Chr1:134761880-134774153 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002747	antisense lncRNA gene	Chr1:138546473-138558761 (+)
A/J	MGP_AJ_G0002723	antisense lncRNA gene	Chr1:133313909-133326202 (+)
AKR/J	MGP_AKRJ_G0002704	antisense lncRNA gene	Chr1:137291575-137303866 (+)
BALB/cJ	MGP_BALBcJ_G0002710	antisense lncRNA gene	Chr1:133637466-133649743 (+)
C3H/HeJ	MGP_C3HHeJ_G0002668	antisense lncRNA gene	Chr1:137382389-137394679 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002853	antisense lncRNA gene	Chr1:143575252-143587525 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002400	antisense lncRNA gene	Chr1:126434687-126447182 (+)
CAST/EiJ	MGP_CASTEiJ_G0002641	antisense lncRNA gene	Chr1:136449679-136461965 (+)
CBA/J	MGP_CBAJ_G0002664	antisense lncRNA gene	Chr1:148514239-148526523 (+)
DBA/2J	MGP_DBA2J_G0002670	antisense lncRNA gene	Chr1:132324996-132337715 (+)
FVB/NJ	MGP_FVBNJ_G0002690	antisense lncRNA gene	Chr1:130959599-130971882 (+)
LP/J	MGP_LPJ_G0002748	antisense lncRNA gene	Chr1:139799586-139811859 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002680	antisense lncRNA gene	Chr1:154219838-154232135 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002858	antisense lncRNA gene	Chr1:137030710-137043002 (+)
PWK/PhJ	MGP_PWKPhJ_G0002598	antisense lncRNA gene	Chr1:131343083-131355419 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002550	antisense lncRNA gene	Chr1:135998216-136010473 (+)
WSB/EiJ	MGP_WSBEiJ_G0002670	antisense lncRNA gene	Chr1:137055381-137067661 (+)

Homology

• Gene Tree
  Gm28892
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm28892
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000101168 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101168	Ensembl Gene Model | MGI Sequence Detail	12274	C57BL/6J
transcript	ENSMUST00000188123	Ensembl | MGI Sequence Detail	2721	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45