Gm28902 Gene Detail

Summary

• Symbol
  Gm28902
• Name
  predicted gene 28902

• Feature Type
  lncRNA gene
• IDs
  MGI:5579608
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:75249249-75252296 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  190 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579608	lncRNA gene	Chr1:75249249-75252296 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002704	antisense lncRNA gene	Chr1:75838879-75841926 (+)
A/J	MGP_AJ_G0002680	antisense lncRNA gene	Chr1:73195191-73198240 (+)
AKR/J	MGP_AKRJ_G0002660	antisense lncRNA gene	Chr1:75225312-75228359 (+)
BALB/cJ	MGP_BALBcJ_G0002666	antisense lncRNA gene	Chr1:73256296-73259343 (+)
C3H/HeJ	MGP_C3HHeJ_G0002626	antisense lncRNA gene	Chr1:75560492-75563541 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002810	antisense lncRNA gene	Chr1:78790468-78793515 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002357	antisense lncRNA gene	Chr1:68756431-68759464 (+)
CAST/EiJ	MGP_CASTEiJ_G0002598	antisense lncRNA gene	Chr1:74902021-74905093 (+)
CBA/J	MGP_CBAJ_G0002621	antisense lncRNA gene	Chr1:81348967-81352016 (+)
DBA/2J	MGP_DBA2J_G0002626	antisense lncRNA gene	Chr1:72513341-72516388 (+)
FVB/NJ	MGP_FVBNJ_G0002646	antisense lncRNA gene	Chr1:71716569-71719616 (+)
LP/J	MGP_LPJ_G0002706	antisense lncRNA gene	Chr1:76963298-76966345 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002636	antisense lncRNA gene	Chr1:84704034-84707081 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002815	antisense lncRNA gene	Chr1:75295388-75298435 (+)
PWK/PhJ	MGP_PWKPhJ_G0002556	antisense lncRNA gene	Chr1:71985980-71989037 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002510	antisense lncRNA gene	Chr1:74661316-74664341 (+)
WSB/EiJ	MGP_WSBEiJ_G0002628	antisense lncRNA gene	Chr1:75108696-75111739 (+)

Homology

• Gene Tree
  Gm28902
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving Gm28902
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000100556 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100556	Ensembl Gene Model | MGI Sequence Detail	3048	C57BL/6J
transcript	ENSMUST00000191531	Ensembl | MGI Sequence Detail	215	Not Applicable

References

• Summaries
  All 11

  Phenotypes 9
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:41878 Zoltewicz JS, et al., oto is a homeotic locus with a role in anteroposterior development that is partially redundant with Lim1. Development. 1999 Nov;126(22):5085-95