Gm28991 Gene Detail

Summary

• Symbol
  Gm28991
• Name
  predicted gene 28991

• Feature Type
  lncRNA gene
• IDs
  MGI:5579697
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr19:38737204-38741089 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic

Strain
Comparison

• SNPs within 2kb
  235 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579697	lncRNA gene	Chr19:38737204-38741089 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003479	antisense lncRNA gene	Chr19:37825098-37828974 (-)
A/J	MGP_AJ_G0003459	antisense lncRNA gene	Chr19:35996470-36000325 (-)
AKR/J	MGP_AKRJ_G0003438	antisense lncRNA gene	Chr19:37184249-37188131 (-)
BALB/cJ	MGP_BALBcJ_G0003448	antisense lncRNA gene	Chr19:36095757-36099633 (-)
C3H/HeJ	MGP_C3HHeJ_G0003396	antisense lncRNA gene	Chr19:37298363-37302230 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003586	antisense lncRNA gene	Chr19:38906332-38910199 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003096	antisense lncRNA gene	Chr19:35316854-35322192 (-)
CAST/EiJ	MGP_CASTEiJ_G0003359	antisense lncRNA gene	Chr19:37160523-37164400 (-)
CBA/J	MGP_CBAJ_G0003393	antisense lncRNA gene	Chr19:40732296-40736166 (-)
DBA/2J	MGP_DBA2J_G0003401	antisense lncRNA gene	Chr19:35830950-35834835 (-)
FVB/NJ	MGP_FVBNJ_G0003420	antisense lncRNA gene	Chr19:35662472-35666336 (-)
LP/J	MGP_LPJ_G0003474	antisense lncRNA gene	Chr19:37915873-37919746 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003408	antisense lncRNA gene	Chr19:40471637-40475519 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003589	antisense lncRNA gene	Chr19:37312440-37316310 (-)
PWK/PhJ	MGP_PWKPhJ_G0003315	antisense lncRNA gene	Chr19:35705979-35710389 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0003260	antisense lncRNA gene	Chr19:36151880-36155742 (-)
WSB/EiJ	MGP_WSBEiJ_G0003394	antisense lncRNA gene	Chr19:37397086-37400959 (-)

Homology

• Gene Tree
  Gm28991
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000101079 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101079	Ensembl Gene Model | MGI Sequence Detail	3886	C57BL/6J
transcript	ENSMUST00000186584	Ensembl | MGI Sequence Detail	543	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;