Gm29008 Gene Detail

Summary

• Symbol
  Gm29008
• Name
  predicted gene 29008

• Feature Type
  sense intronic lncRNA gene
• IDs
  MGI:5579714
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:124694610-124694907 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic

Strain
Comparison

• SNPs within 2kb
  86 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579714	sense intronic lncRNA gene	Chr6:124694610-124694907 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0002073	unclassified gene	Chr6:128021194-128021491 (-)
A/J	MGP_AJ_G0002049	unclassified gene	Chr6:123207881-123208178 (-)
AKR/J	MGP_AKRJ_G0002035	unclassified gene	Chr6:126567428-126567725 (-)
BALB/cJ	MGP_BALBcJ_G0002046	unclassified gene	Chr6:122802714-122803011 (-)
C3H/HeJ	MGP_C3HHeJ_G0002021	unclassified gene	Chr6:126615969-126616266 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0002168	unclassified gene	Chr6:131404667-131404964 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001797	unclassified gene	Chr6:120395235-120395528 (-)
CAST/EiJ	MGP_CASTEiJ_G0001988	unclassified gene	Chr6:126817251-126817548 (-)
CBA/J	MGP_CBAJ_G0002016	unclassified gene	Chr6:136435551-136435848 (-)
DBA/2J	MGP_DBA2J_G0002020	unclassified gene	Chr6:122134419-122134716 (-)
FVB/NJ	MGP_FVBNJ_G0002028	unclassified gene	Chr6:121037858-121038155 (-)
LP/J	MGP_LPJ_G0002075	unclassified gene	Chr6:128188372-128188669 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002005	unclassified gene	Chr6:140490949-140491246 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002158	unclassified gene	Chr6:126459391-126459688 (-)
PWK/PhJ	MGP_PWKPhJ_G0001950	unclassified gene	Chr6:120362032-120362329 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0001911	unclassified gene	Chr6:124534169-124534461 (-)
WSB/EiJ	MGP_WSBEiJ_G0002014	unclassified gene	Chr6:126816172-126816471 (-)

Homology

• Gene Tree
  Gm29008
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000099609 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099609	Ensembl Gene Model | MGI Sequence Detail	298	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;