Gm29050 Gene Detail

Summary

• Symbol
  Gm29050
• Name
  predicted gene 29050

• Feature Type
  lncRNA gene
• IDs
  MGI:5579756
  NCBI Gene: 102638468
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:5461742-5469927 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic

Strain
Comparison

• SNPs within 2kb
  331 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579756	lncRNA gene	Chr17:5439038-5469927 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003365	antisense lncRNA gene	Chr17:2489585-2520319 (+)
A/J	MGP_AJ_G0003341	antisense lncRNA gene	Chr17:2462338-2493490 (+)
AKR/J	MGP_AKRJ_G0003324	antisense lncRNA gene	Chr17:2503817-2537637 (+)
BALB/cJ	MGP_BALBcJ_G0003330	antisense lncRNA gene	Chr17:2429086-2460162 (+)
C3H/HeJ	MGP_C3HHeJ_G0003283	antisense lncRNA gene	Chr17:2548674-2579497 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003471	antisense lncRNA gene	Chr17:2651728-2684721 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002988	antisense lncRNA gene	Chr17:2284704-2317624 (+)
CAST/EiJ	MGP_CASTEiJ_G0003247	antisense lncRNA gene	Chr17:2557866-2593242 (+)
CBA/J	MGP_CBAJ_G0003280	antisense lncRNA gene	Chr17:2754657-2789664 (+)
DBA/2J	MGP_DBA2J_G0003285	antisense lncRNA gene	Chr17:2322314-2354229 (+)
FVB/NJ	MGP_FVBNJ_G0003303	antisense lncRNA gene	Chr17:2365285-2396601 (+)
LP/J	MGP_LPJ_G0003358	antisense lncRNA gene	Chr17:2620156-2652001 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003293	antisense lncRNA gene	Chr17:2632553-2663573 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003474	antisense lncRNA gene	Chr17:2543569-2574381 (+)
PWK/PhJ	MGP_PWKPhJ_G0003206	antisense lncRNA gene	Chr17:2391868-2424711 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003150	antisense lncRNA gene	Chr17:2488225-2521169 (+)
WSB/EiJ	MGP_WSBEiJ_G0003281	antisense lncRNA gene	Chr17:2499093-2530640 (+)

Homology

• Gene Tree
  Gm29050
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  3

• Ensembl
  ENSMUSG00000101133 (Evidence)
• NCBI Gene
  102638468

Representative Sequences			Length	Strain/Species
genomic	102638468	NCBI Gene Model | MGI Sequence Detail	8186	C57BL/6J
transcript	XR_003952359	RefSeq | MGI Sequence Detail	7678	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;