Gm29054 Gene Detail

Summary

• Symbol
  Gm29054
• Name
  predicted gene 29054

• Feature Type
  lncRNA gene
• IDs
  MGI:5579760
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:83027968-83029417 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic

Strain
Comparison

• SNPs within 2kb
  65 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579760	lncRNA gene	Chr9:83027968-83029417 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015749	unclassified non-coding RNA gene	Chr9:83812124-83813573 (+)
A/J	MGP_AJ_G0015726	unclassified non-coding RNA gene	Chr9:80900861-80902310 (+)
AKR/J	MGP_AKRJ_G0015690	unclassified non-coding RNA gene	Chr9:82799304-82800743 (+)
BALB/cJ	MGP_BALBcJ_G0015687	unclassified non-coding RNA gene	Chr9:80549453-80550902 (+)
C3H/HeJ	MGP_C3HHeJ_G0015509	unclassified non-coding RNA gene	Chr9:83334157-83335606 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0016143	unclassified non-coding RNA gene	Chr9:86118190-86119639 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013869	unclassified non-coding RNA gene	Chr9:79854265-79855689 (+)
CAST/EiJ	MGP_CASTEiJ_G0015064	unclassified non-coding RNA gene	Chr9:83725329-83726773 (+)
CBA/J	MGP_CBAJ_G0015489	unclassified non-coding RNA gene	Chr9:89166731-89168170 (+)
DBA/2J	MGP_DBA2J_G0015587	unclassified non-coding RNA gene	Chr9:80489878-80491314 (+)
FVB/NJ	MGP_FVBNJ_G0015592	unclassified non-coding RNA gene	Chr9:79643559-79645008 (+)
LP/J	MGP_LPJ_G0015667	unclassified non-coding RNA gene	Chr9:84009754-84011203 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015615	unclassified non-coding RNA gene	Chr9:90580038-90581487 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0016185	unclassified non-coding RNA gene	Chr9:82974527-82975976 (+)
PWK/PhJ	MGP_PWKPhJ_G0014845	unclassified non-coding RNA gene	Chr9:80657095-80658531 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014633	unclassified non-coding RNA gene	Chr9:83146991-83148427 (+)
WSB/EiJ	MGP_WSBEiJ_G0015168	unclassified non-coding RNA gene	Chr9:82956536-82957985 (+)

Homology

• Gene Tree
  Gm29054
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm29054
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000101144 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101144	Ensembl Gene Model | MGI Sequence Detail	1450	C57BL/6J
transcript	ENSMUST00000194148	Ensembl | MGI Sequence Detail	1450	Not Applicable

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;