Gm29069 Gene Detail

Summary

• Symbol
  Gm29069
• Name
  predicted gene 29069

• Feature Type
  lncRNA gene
• IDs
  MGI:5579775
  NCBI Gene: 118567757
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:76490630-76505269 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  535 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579775	lncRNA gene	Chr1:76397329-76505269 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004878	lincRNA gene	Chr1:77035624-77153284 (+)
A/J	MGP_AJ_G0004859	lincRNA gene	Chr1:74353786-74456362 (+)
AKR/J	MGP_AKRJ_G0004837	lincRNA gene	Chr1:76396391-76497508 (+)
BALB/cJ	MGP_BALBcJ_G0004840	lincRNA gene	Chr1:74438326-74541035 (+)
C3H/HeJ	MGP_C3HHeJ_G0004789	lincRNA gene	Chr1:76740528-76847488 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004991	lincRNA gene	Chr1:80016752-80134299 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004418	lincRNA gene	Chr1:69869987-69973541 (+)
CAST/EiJ	MGP_CASTEiJ_G0004742	lincRNA gene	Chr1:76076743-76188307 (+)
CBA/J	MGP_CBAJ_G0004782	lincRNA gene	Chr1:82634451-82747986 (+)
DBA/2J	MGP_DBA2J_G0004800	lincRNA gene	Chr1:73670922-73772257 (+)
FVB/NJ	MGP_FVBNJ_G0004820	lincRNA gene	Chr1:72861809-72962784 (+)
LP/J	MGP_LPJ_G0004879	lincRNA gene	Chr1:78187430-78290837 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004804	lincRNA gene	Chr1:85955670-86069052 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004995	lincRNA gene	Chr1:76494776-76599487 (+)
PWK/PhJ	MGP_PWKPhJ_G0004695	lincRNA gene	Chr1:73143941-73247262 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004621	lincRNA gene	Chr1:75821469-75940796 (+)
WSB/EiJ	MGP_WSBEiJ_G0004787	lincRNA gene	Chr1:76297729-76403297 (+)

Homology

• Gene Tree
  Gm29069
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  10 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Gene trapped
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving Gm29069
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000100827 (Evidence)
• NCBI Gene
  118567757

Representative Sequences			Length	Strain/Species
genomic	118567757	NCBI Gene Model | MGI Sequence Detail	14640	C57BL/6J
transcript	XR_004936186	RefSeq | MGI Sequence Detail	1114	C57BL/6J

References

• Summaries
  All 14

  Phenotypes 10
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:41878 Zoltewicz JS, et al., oto is a homeotic locus with a role in anteroposterior development that is partially redundant with Lim1. Development. 1999 Nov;126(22):5085-95