Gm29094 Gene Detail

Summary

• Symbol
  Gm29094
• Name
  predicted gene 29094

• Feature Type
  protein coding gene
• IDs
  MGI:5579800
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:89081432-89097524 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic

Strain
Comparison

• SNPs within 2kb
  277 from dbSNP Build 142
• Strain Annotations
  7

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	no annotation
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	MGP_AKRJ_G0035024	protein coding gene	Chr9:88549868-88570127 (-)
BALB/cJ	MGP_BALBcJ_G0035087	protein coding gene	Chr9:86640788-86657188 (+)
C3H/HeJ	MGP_C3HHeJ_G0034798	protein coding gene	Chr9:89486980-89502995 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0035606	protein coding gene	Chr9:92291011-92294345 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0034928	protein coding gene	Chr9:86030648-86032043 (-)
FVB/NJ	MGP_FVBNJ_G0034868	protein coding gene	Chr9:85066548-85084897 (-)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0034914	protein coding gene	Chr9:97456381-97482454 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm29094
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm29094
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  11
• UniProt
  1

• Ensembl
  ENSMUSG00000100838 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100838	Ensembl Gene Model | MGI Sequence Detail	16093	C57BL/6J
transcript	ENSMUST00000138109	Ensembl | MGI Sequence Detail	664	Not Applicable
polypeptide	ENSMUSP00000119881	Ensembl | MGI Sequence Detail	221	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR002698 5-formyltetrahydrofolate cyclo-ligase
  IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily
  IPR020717 Apoptosis regulator, Bcl-2, BH1 motif, conserved site
  IPR046371 Bcl-2, Bcl-2 homology region 1-3
  IPR026298 Bcl-2 family
  IPR002475 Bcl2-like
  IPR036834 Bcl-2-like superfamily
  IPR013282 Bcl-2-related protein A1
  IPR037171 NagB/RpiA transferase-like

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm29094:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr2967	Chr9:89081407-89081410 (+)	-23 bp