Gm29099 Gene Detail

Summary

• Symbol
  Gm29099
• Name
  predicted gene 29099

• Feature Type
  lncRNA gene
• IDs
  MGI:5579805
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:92252232-92257610 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  243 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579805	lncRNA gene	Chr1:92252232-92257610 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004917	lincRNA gene	Chr1:93908376-93913754 (+)
A/J	MGP_AJ_G0004899	lincRNA gene	Chr1:90533956-90539487 (+)
AKR/J	MGP_AKRJ_G0004877	lincRNA gene	Chr1:93215481-93220864 (+)
BALB/cJ	MGP_BALBcJ_G0004880	lincRNA gene	Chr1:90707769-90713795 (+)
C3H/HeJ	MGP_C3HHeJ_G0004829	lincRNA gene	Chr1:93429383-93434767 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005030	lincRNA gene	Chr1:97460761-97467778 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004454	lincRNA gene	Chr1:84770743-84776470 (+)
CAST/EiJ	MGP_CASTEiJ_G0004779	lincRNA gene	Chr1:92775291-92782026 (+)
CBA/J	MGP_CBAJ_G0004821	lincRNA gene	Chr1:100614609-100619993 (+)
DBA/2J	MGP_DBA2J_G0004840	lincRNA gene	Chr1:89741752-89746716 (+)
FVB/NJ	MGP_FVBNJ_G0004859	lincRNA gene	Chr1:88794054-88800041 (+)
LP/J	MGP_LPJ_G0004918	lincRNA gene	Chr1:95076807-95082568 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004845	lincRNA gene	Chr1:103802177-103807555 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005035	lincRNA gene	Chr1:93238866-93246315 (+)
PWK/PhJ	MGP_PWKPhJ_G0004732	lincRNA gene	Chr1:89172283-89177679 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004658	lincRNA gene	Chr1:92178333-92184991 (+)
WSB/EiJ	MGP_WSBEiJ_G0004825	lincRNA gene	Chr1:93045568-93050923 (+)

Homology

• Gene Tree
  Gm29099
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm29099
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000101265 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101265	Ensembl Gene Model | MGI Sequence Detail	5379	C57BL/6J
transcript	ENSMUST00000187370	Ensembl | MGI Sequence Detail	760	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45