Gm29101 Gene Detail

Summary

• Symbol
  Gm29101
• Name
  predicted gene 29101

• Feature Type
  lncRNA gene
• IDs
  MGI:5579807
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:91750237-91751707 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  166 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579807	lncRNA gene	Chr1:91750237-91751707 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0036869	sense intronic lncRNA gene	Chr1:93379741-93381211 (+)
A/J	MGP_AJ_G0036857	sense intronic lncRNA gene	Chr1:90020933-90022403 (+)
AKR/J	MGP_AKRJ_G0036806	sense intronic lncRNA gene	Chr1:92690697-92692167 (+)
BALB/cJ	MGP_BALBcJ_G0036848	sense intronic lncRNA gene	Chr1:90202800-90204270 (+)
C3H/HeJ	MGP_C3HHeJ_G0036533	sense intronic lncRNA gene	Chr1:92911252-92912722 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037361	sense intronic lncRNA gene	Chr1:96942082-96943552 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034423	sense intronic lncRNA gene	Chr1:84268271-84269790 (+)
CAST/EiJ	MGP_CASTEiJ_G0035723	sense intronic lncRNA gene	Chr1:92255766-92257238 (+)
CBA/J	MGP_CBAJ_G0036509	sense intronic lncRNA gene	Chr1:100056338-100057808 (+)
DBA/2J	MGP_DBA2J_G0036685	sense intronic lncRNA gene	Chr1:89237948-89239418 (+)
FVB/NJ	MGP_FVBNJ_G0036637	sense intronic lncRNA gene	Chr1:88283748-88285218 (+)
LP/J	MGP_LPJ_G0036732	sense intronic lncRNA gene	Chr1:94547243-94548713 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036642	sense intronic lncRNA gene	Chr1:103273295-103274765 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037477	sense intronic lncRNA gene	Chr1:92712463-92713933 (+)
PWK/PhJ	MGP_PWKPhJ_G0035416	sense intronic lncRNA gene	Chr1:88659786-88661340 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035231	sense intronic lncRNA gene	Chr1:91641928-91643404 (+)
WSB/EiJ	MGP_WSBEiJ_G0035925	sense intronic lncRNA gene	Chr1:92519036-92520506 (+)

Homology

• Gene Tree
  Gm29101
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm29101
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000101414 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101414	Ensembl Gene Model | MGI Sequence Detail	1471	C57BL/6J
transcript	ENSMUST00000188329	Ensembl | MGI Sequence Detail	1471	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45