Gm29139 Gene Detail

Summary

• Symbol
  Gm29139
• Name
  predicted gene 29139

• Feature Type
  lncRNA gene
• IDs
  MGI:5579845
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:92184016-92187197 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic

Strain
Comparison

• SNPs within 2kb
  252 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579845	lncRNA gene	Chr9:92184016-92187197 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0007480	lincRNA gene	Chr9:93352016-93355820 (-)
A/J	MGP_AJ_G0007475	lincRNA gene	Chr9:90123822-90126980 (-)
AKR/J	MGP_AKRJ_G0007447	lincRNA gene	Chr9:92220955-92224134 (-)
BALB/cJ	MGP_BALBcJ_G0007452	lincRNA gene	Chr9:89772244-89775404 (-)
C3H/HeJ	MGP_C3HHeJ_G0007397	lincRNA gene	Chr9:92692855-92696015 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0007624	lincRNA gene	Chr9:95962042-95966523 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006807	lincRNA gene	Chr9:88133567-88138167 (-)
CAST/EiJ	MGP_CASTEiJ_G0007300	lincRNA gene	Chr9:92430779-92433942 (-)
CBA/J	MGP_CBAJ_G0007378	lincRNA gene	Chr9:99300504-99303658 (-)
DBA/2J	MGP_DBA2J_G0007404	lincRNA gene	Chr9:89640767-89644022 (-)
FVB/NJ	MGP_FVBNJ_G0007420	lincRNA gene	Chr9:88605217-88608457 (-)
LP/J	MGP_LPJ_G0007484	lincRNA gene	Chr9:93552988-93556121 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007401	lincRNA gene	Chr9:101234088-101236790 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007629	lincRNA gene	Chr9:92502588-92505742 (-)
PWK/PhJ	MGP_PWKPhJ_G0007241	lincRNA gene	Chr9:89797755-89801105 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0007145	lincRNA gene	Chr9:92545740-92548894 (-)
WSB/EiJ	MGP_WSBEiJ_G0007360	lincRNA gene	Chr9:92380160-92383334 (-)

Homology

• Gene Tree
  Gm29139
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm29139
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000101370 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101370	Ensembl Gene Model | MGI Sequence Detail	3182	C57BL/6J
transcript	ENSMUST00000185794	Ensembl | MGI Sequence Detail	248	Not Applicable

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;