Gm29141 Pseudogene Detail

Summary

• Symbol
  Gm29141
• Name
  predicted gene 29141

• Feature Type
  pseudogene
• IDs
  MGI:5579847
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:103291711-103351383 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  2283 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579847	pseudogene	Chr1:103291711-103351383 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039909	pseudogene	Chr1:105344181-105391735 (+)
A/J	MGP_AJ_G0039916	pseudogene	Chr1:101720266-101767808 (+)
AKR/J	MGP_AKRJ_G0039838	pseudogene	Chr1:104488396-104543901 (+)
BALB/cJ	MGP_BALBcJ_G0039893	pseudogene	Chr1:101804535-101851808 (+)
C3H/HeJ	MGP_C3HHeJ_G0039540	pseudogene	Chr1:104929304-104981927 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040463	pseudogene	Chr1:109506625-109561137 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037041	pseudogene	Chr1:96144153-96191062 (+)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0039508	pseudogene	Chr1:113141541-113214938 (+)
DBA/2J	MGP_DBA2J_G0039711	pseudogene	Chr1:100777666-100825637 (+)
FVB/NJ	MGP_FVBNJ_G0039674	pseudogene	Chr1:99748610-99809863 (+)
LP/J	MGP_LPJ_G0039746	pseudogene	Chr1:106607774-106672416 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039663	pseudogene	Chr1:117358040-117436536 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040558	pseudogene	Chr1:104567796-104614909 (+)
PWK/PhJ	MGP_PWKPhJ_G0038335	pseudogene	Chr1:99869037-99919020 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0038872	pseudogene	Chr1:104373116-104420205 (+)

Homology

• Gene Tree
  Gm29141
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm29141
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000099469 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099469	Ensembl Gene Model | MGI Sequence Detail	59673	C57BL/6J
transcript	ENSMUST00000190357	Ensembl | MGI Sequence Detail	882	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45