Gm29168 Gene Detail

Summary

• Symbol
  Gm29168
• Name
  predicted gene 29168

• Feature Type
  lncRNA gene
• IDs
  MGI:5579874
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:87147458-87148144 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579874	lncRNA gene	Chr17:87147458-87148144 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005760	lincRNA gene	Chr17:90181918-90182604 (+)
A/J	MGP_AJ_G0005747	lincRNA gene	Chr17:87281177-87281863 (+)
AKR/J	MGP_AKRJ_G0005726	lincRNA gene	Chr17:88745163-88745849 (+)
BALB/cJ	MGP_BALBcJ_G0005727	lincRNA gene	Chr17:87127561-87128247 (+)
C3H/HeJ	MGP_C3HHeJ_G0005675	lincRNA gene	Chr17:89609806-89610492 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005887	lincRNA gene	Chr17:93305556-93306242 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005235	lincRNA gene	Chr17:82443387-82444055 (+)
CAST/EiJ	MGP_CASTEiJ_G0005618	lincRNA gene	Chr17:90441851-90442535 (+)
CBA/J	MGP_CBAJ_G0005663	lincRNA gene	Chr17:97215748-97216434 (+)
DBA/2J	MGP_DBA2J_G0005681	lincRNA gene	Chr17:85731291-85731977 (+)
FVB/NJ	MGP_FVBNJ_G0005707	lincRNA gene	Chr17:85229505-85230191 (+)
LP/J	MGP_LPJ_G0005762	lincRNA gene	Chr17:90967376-90968062 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005692	lincRNA gene	Chr17:97139287-97139973 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005887	lincRNA gene	Chr17:89263157-89263843 (+)
PWK/PhJ	MGP_PWKPhJ_G0005562	lincRNA gene	Chr17:85360377-85361063 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0005669	lincRNA gene	Chr17:90108389-90109075 (+)

Homology

• Gene Tree
  Gm29168
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000099798 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099798	Ensembl Gene Model | MGI Sequence Detail	687	C57BL/6J
transcript	ENSMUST00000189953	Ensembl | MGI Sequence Detail	687	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;