Gm29199 Pseudogene Detail

Summary

• Symbol
  Gm29199
• Name
  predicted gene 29199

• Feature Type
  pseudogene
• IDs
  MGI:5579905
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:12631745-12632519 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic

Strain
Comparison

• SNPs within 2kb
  174 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579905	pseudogene	Chr18:12631745-12632519 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011418	pseudogene	Chr18:9667845-9668618 (-)
A/J	MGP_AJ_G0011413	pseudogene	Chr18:9503812-9504586 (-)
AKR/J	MGP_AKRJ_G0011377	pseudogene	Chr18:9795416-9796057 (-)
BALB/cJ	MGP_BALBcJ_G0011390	pseudogene	Chr18:9452308-9453082 (-)
C3H/HeJ	MGP_C3HHeJ_G0011279	pseudogene	Chr18:9667965-9668739 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011681	pseudogene	Chr18:10164522-10165296 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010242	pseudogene	Chr18:9075391-9076145 (-)
CAST/EiJ	MGP_CASTEiJ_G0011087	pseudogene	Chr18:9547565-9548339 (-)
CBA/J	MGP_CBAJ_G0011255	pseudogene	Chr18:10313583-10314357 (-)
DBA/2J	MGP_DBA2J_G0011306	pseudogene	Chr18:9345595-9346369 (-)
FVB/NJ	MGP_FVBNJ_G0011313	pseudogene	Chr18:9213041-9213815 (-)
LP/J	MGP_LPJ_G0011378	pseudogene	Chr18:9767108-9767881 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011305	pseudogene	Chr18:10469393-10470167 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011669	pseudogene	Chr18:9558377-9559151 (-)
PWK/PhJ	MGP_PWKPhJ_G0010952	pseudogene	Chr18:9415688-9416573 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010776	pseudogene	Chr18:9825883-9826657 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm29199
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000100090 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100090	Ensembl Gene Model | MGI Sequence Detail	775	C57BL/6J
transcript	ENSMUST00000187766	Ensembl | MGI Sequence Detail	775	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;