Gm29201 Pseudogene Detail

Summary

• Symbol
  Gm29201
• Name
  predicted gene 29201

• Feature Type
  pseudogene
• IDs
  MGI:5579907
  NCBI Gene: 102640186
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:12498856-12499286 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic

Strain
Comparison

• SNPs within 2kb
  210 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579907	pseudogene	Chr18:12498856-12499286 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010523	pseudogene	Chr10:60631799-60632239 (+)
A/J	MGP_AJ_G0011412	pseudogene	Chr18:9364316-9364746 (+)
AKR/J	MGP_AKRJ_G0011376	pseudogene	Chr18:9656233-9656663 (+)
BALB/cJ	MGP_BALBcJ_G0011389	pseudogene	Chr18:9316113-9316543 (+)
C3H/HeJ	MGP_C3HHeJ_G0011278	pseudogene	Chr18:9527441-9527871 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011680	pseudogene	Chr18:10021358-10021788 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010239	pseudogene	Chr10:60252873-60253313 (+)
CBA/J	MGP_CBAJ_G0011254	pseudogene	Chr18:10147226-10147656 (+)
DBA/2J	MGP_DBA2J_G0011305	pseudogene	Chr18:9207506-9207936 (+)
FVB/NJ	MGP_FVBNJ_G0011312	pseudogene	Chr18:9077157-9077586 (+)
LP/J	MGP_LPJ_G0010505	pseudogene	Chr10:61043176-61043798 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011304	pseudogene	Chr18:10323346-10323776 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011668	pseudogene	Chr18:9420009-9420439 (+)
PWK/PhJ	MGP_PWKPhJ_G0010136	pseudogene	Chr10:57934049-57934714 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009950	pseudogene	Chr10:59638570-59638949 (-)
WSB/EiJ	MGP_WSBEiJ_G0010303	pseudogene	Chr10:60100977-60101364 (+)

Homology

• Gene Tree
  Gm29201
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000099663 (Evidence)
• NCBI Gene
  102640186

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099663	Ensembl Gene Model | MGI Sequence Detail	431	C57BL/6J
transcript	ENSMUST00000189120	Ensembl | MGI Sequence Detail	431	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;