Gm29216 Pseudogene Detail

Summary

• Symbol
  Gm29216
• Name
  predicted gene 29216

• Feature Type
  pseudogene
• IDs
  MGI:5579922
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:24654787-24655278 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  78 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579922	pseudogene	Chr1:24654787-24655278 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040214	pseudogene	Chr2:20296360-20296850 (-)
A/J	MGP_AJ_G0040199	pseudogene	Chr2:19472876-19474308 (-)
AKR/J	MGP_AKRJ_G0039912	pseudogene	Chr11:91490423-91490913 (-)
BALB/cJ	MGP_BALBcJ_G0040199	pseudogene	Chr2:19588471-19588961 (-)
C3H/HeJ	MGP_C3HHeJ_G0039838	pseudogene	Chr2:20079053-20079543 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0039095	pseudogene	Chr6:6854964-6855454 (-)
CBA/J	MGP_CBAJ_G0039806	pseudogene	Chr2:21684333-21684823 (-)
DBA/2J	MGP_DBA2J_G0040000	pseudogene	Chr2:19380732-19381222 (-)
FVB/NJ	MGP_FVBNJ_G0039749	pseudogene	Chr11:87817989-87818479 (-)
LP/J	MGP_LPJ_G0040044	pseudogene	Chr2:20243287-20243777 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039637	pseudogene	Chr1:25061214-25061751 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040647	pseudogene	Chr11:91743543-91744033 (-)
PWK/PhJ	MGP_PWKPhJ_G0038405	pseudogene	Chr11:89206457-89206947 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038313	pseudogene	Chr2:20187772-20189701 (-)
WSB/EiJ	MGP_WSBEiJ_G0038847	pseudogene	Chr1:22113547-22114037 (-)

Homology

• Gene Tree
  Gm29216
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm29216
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000101249 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101249	Ensembl Gene Model | MGI Sequence Detail	492	C57BL/6J
transcript	ENSMUST00000187117	Ensembl | MGI Sequence Detail	492	Not Applicable

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;