Gm29230 Gene Detail

Summary

• Symbol
  Gm29230
• Name
  predicted gene 29230

• Feature Type
  lncRNA gene
• IDs
  MGI:5579936
  NCBI Gene: 102639521
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:50966331-50982277 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  591 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579936	lncRNA gene	Chr3:50966327-50996764 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0006180	lincRNA gene	Chr3:49506522-49523604 (-)
A/J	MGP_AJ_G0006172	lincRNA gene	Chr3:48067639-48083796 (-)
AKR/J	MGP_AKRJ_G0006148	lincRNA gene	Chr3:49011162-49027128 (-)
BALB/cJ	MGP_BALBcJ_G0006148	lincRNA gene	Chr3:47925454-47941329 (-)
C3H/HeJ	MGP_C3HHeJ_G0006098	lincRNA gene	Chr3:49230725-49247651 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0006311	lincRNA gene	Chr3:51494817-51511017 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005621	lincRNA gene	Chr3:44709564-44725926 (-)
CAST/EiJ	MGP_CASTEiJ_G0006033	lincRNA gene	Chr3:49275127-49290944 (-)
CBA/J	MGP_CBAJ_G0006083	lincRNA gene	Chr3:53091887-53110580 (-)
DBA/2J	MGP_DBA2J_G0006102	lincRNA gene	Chr3:47680648-47696610 (-)
FVB/NJ	MGP_FVBNJ_G0006126	lincRNA gene	Chr3:46661864-46681122 (-)
LP/J	MGP_LPJ_G0006185	lincRNA gene	Chr3:50255797-50273357 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006116	lincRNA gene	Chr3:57320897-57337875 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0006315	lincRNA gene	Chr3:48942597-48958551 (-)
PWK/PhJ	MGP_PWKPhJ_G0005978	lincRNA gene	Chr3:47303656-47321526 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0005887	lincRNA gene	Chr3:48570447-48589022 (-)
WSB/EiJ	MGP_WSBEiJ_G0006080	lincRNA gene	Chr3:49032103-49048974 (-)

Homology

• Gene Tree
  Gm29230
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  3
• Gene trapped
  1
• Radiation induced
  2
• Genomic Mutations
  2 involving Gm29230
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000102067 (Evidence)
• NCBI Gene
  102639521

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102067	Ensembl Gene Model | MGI Sequence Detail	15947	C57BL/6J
transcript	ENSMUST00000189687	Ensembl | MGI Sequence Detail	412	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 14

  Diseases 1

  Phenotypes 9
• Earliest
  J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426