Gm29246 Gene Detail

Summary

• Symbol
  Gm29246
• Name
  predicted gene 29246

• Feature Type
  lncRNA gene
• IDs
  MGI:5579952
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:43049259-43049954 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic

Strain
Comparison

• SNPs within 2kb
  38 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579952	lncRNA gene	Chr10:43049259-43049954 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002854	antisense lncRNA gene	Chr10:41920710-41921412 (+)
A/J	MGP_AJ_G0002831	antisense lncRNA gene	Chr10:40749774-40750480 (+)
AKR/J	MGP_AKRJ_G0002811	antisense lncRNA gene	Chr10:41363566-41364254 (+)
BALB/cJ	MGP_BALBcJ_G0002818	antisense lncRNA gene	Chr10:40802965-40803258 (+)
C3H/HeJ	MGP_C3HHeJ_G0002775	antisense lncRNA gene	Chr10:41728291-41728584 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002961	antisense lncRNA gene	Chr10:43200591-43201313 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002504	antisense lncRNA gene	Chr10:38593442-38594121 (+)
CAST/EiJ	MGP_CASTEiJ_G0002747	antisense lncRNA gene	Chr10:41937040-41939309 (+)
CBA/J	MGP_CBAJ_G0002770	antisense lncRNA gene	Chr10:45188530-45188823 (+)
DBA/2J	MGP_DBA2J_G0002777	antisense lncRNA gene	Chr10:40228816-40229516 (+)
FVB/NJ	MGP_FVBNJ_G0002797	antisense lncRNA gene	Chr10:39722264-39722960 (+)
LP/J	MGP_LPJ_G0002853	antisense lncRNA gene	Chr10:41933338-41934097 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002787	antisense lncRNA gene	Chr10:45903067-45903766 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002964	antisense lncRNA gene	Chr10:41371949-41372637 (+)
PWK/PhJ	MGP_PWKPhJ_G0002705	antisense lncRNA gene	Chr10:40113078-40113806 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002655	antisense lncRNA gene	Chr10:41204901-41205612 (+)
WSB/EiJ	MGP_WSBEiJ_G0002776	antisense lncRNA gene	Chr10:41665639-41665931 (+)

Homology

• Gene Tree
  Gm29246
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm29246
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000102062 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102062	Ensembl Gene Model | MGI Sequence Detail	696	C57BL/6J
transcript	ENSMUST00000189221	Ensembl | MGI Sequence Detail	349	Not Applicable

References

• Summaries
  All 8

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87