Gm29273 Pseudogene Detail

Summary

• Symbol
  Gm29273
• Name
  predicted gene 29273

• Feature Type
  pseudogene
• IDs
  MGI:5579979
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:11678363-11678624 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  166 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579979	pseudogene	Chr1:11678363-11678624 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010001	pseudogene	Chr1:8922601-8922862 (-)
A/J	MGP_AJ_G0009981	pseudogene	Chr1:8948529-8948790 (-)
AKR/J	MGP_AKRJ_G0009963	pseudogene	Chr1:8838859-8839120 (-)
BALB/cJ	MGP_BALBcJ_G0009969	pseudogene	Chr1:8670722-8670983 (-)
C3H/HeJ	MGP_C3HHeJ_G0009900	pseudogene	Chr1:8775383-8775644 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010219	pseudogene	Chr1:9319659-9319920 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0008999	pseudogene	Chr1:7701362-7701623 (-)
CAST/EiJ	MGP_CASTEiJ_G0009751	pseudogene	Chr1:8982231-8982492 (-)
CBA/J	MGP_CBAJ_G0009874	pseudogene	Chr1:9547119-9547380 (-)
DBA/2J	MGP_DBA2J_G0009898	pseudogene	Chr1:8563576-8563837 (-)
FVB/NJ	MGP_FVBNJ_G0009922	pseudogene	Chr1:8414863-8415124 (-)
LP/J	MGP_LPJ_G0009992	pseudogene	Chr1:9132531-9132792 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0009882	pseudogene	Chr1:10184482-10184743 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010194	pseudogene	Chr1:8731246-8731507 (-)
PWK/PhJ	MGP_PWKPhJ_G0009655	pseudogene	Chr1:8401531-8401792 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009474	pseudogene	Chr1:8938547-8938808 (-)
WSB/EiJ	MGP_WSBEiJ_G0009812	pseudogene	Chr1:8751281-8751542 (-)

Homology

• Gene Tree
  Gm29273
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000099845 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099845	Ensembl Gene Model | MGI Sequence Detail	262	C57BL/6J
transcript	ENSMUST00000188880	Ensembl | MGI Sequence Detail	262	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;