Gm29322 Gene Detail

Summary

• Symbol
  Gm29322
• Name
  predicted gene 29322

• Feature Type
  lncRNA gene
• IDs
  MGI:5580028
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:56146569-56148035 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic

Strain
Comparison

• SNPs within 2kb
  199 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580028	lncRNA gene	Chr9:56146569-56148035 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037092	sense intronic lncRNA gene	Chr9:55380044-55381518 (-)
A/J	MGP_AJ_G0037080	sense intronic lncRNA gene	Chr9:53583282-53584756 (-)
AKR/J	MGP_AKRJ_G0037027	sense intronic lncRNA gene	Chr9:54830403-54831877 (-)
BALB/cJ	MGP_BALBcJ_G0037071	sense intronic lncRNA gene	Chr9:53371521-53372987 (-)
C3H/HeJ	MGP_C3HHeJ_G0036758	sense intronic lncRNA gene	Chr9:55290999-55292473 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0037583	sense intronic lncRNA gene	Chr9:56940015-56941481 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034627	sense intronic lncRNA gene	Chr9:52933918-52935383 (-)
CAST/EiJ	MGP_CASTEiJ_G0035944	sense intronic lncRNA gene	Chr9:55327908-55329382 (-)
CBA/J	MGP_CBAJ_G0036733	sense intronic lncRNA gene	Chr9:58892172-58893646 (-)
DBA/2J	MGP_DBA2J_G0036908	sense intronic lncRNA gene	Chr9:53477907-53479381 (-)
FVB/NJ	MGP_FVBNJ_G0036858	sense intronic lncRNA gene	Chr9:52675144-52676618 (-)
LP/J	MGP_LPJ_G0036955	sense intronic lncRNA gene	Chr9:55665138-55666612 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036865	sense intronic lncRNA gene	Chr9:60412290-60413764 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037701	sense intronic lncRNA gene	Chr9:54830986-54832460 (-)
PWK/PhJ	MGP_PWKPhJ_G0035638	sense intronic lncRNA gene	Chr9:53482304-53483770 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035446	sense intronic lncRNA gene	Chr9:55112906-55114382 (-)
WSB/EiJ	MGP_WSBEiJ_G0036146	sense intronic lncRNA gene	Chr9:54764726-54766200 (-)

Homology

• Gene Tree
  Gm29322
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000099543 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099543	Ensembl Gene Model | MGI Sequence Detail	1467	C57BL/6J
transcript	ENSMUST00000185378	Ensembl | MGI Sequence Detail	582	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;