Gm29323 Gene Detail

Summary

• Symbol
  Gm29323
• Name
  predicted gene 29323

• Feature Type
  lncRNA gene
• IDs
  MGI:5580029
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:21619766-21622905 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic

Strain
Comparison

• SNPs within 2kb
  181 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580029	lncRNA gene	Chr10:21619766-21622905 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005107	lincRNA gene	Chr10:19548775-19551914 (+)
A/J	MGP_AJ_G0005090	lincRNA gene	Chr10:18806861-18810000 (+)
AKR/J	MGP_AKRJ_G0005068	lincRNA gene	Chr10:19141175-19144319 (+)
BALB/cJ	MGP_BALBcJ_G0005071	lincRNA gene	Chr10:18865710-18868849 (+)
C3H/HeJ	MGP_C3HHeJ_G0005020	lincRNA gene	Chr10:19463371-19466510 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005221	lincRNA gene	Chr10:20057028-20060167 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004627	lincRNA gene	Chr10:17764783-17767912 (+)
CAST/EiJ	MGP_CASTEiJ_G0004967	lincRNA gene	Chr10:19383830-19386964 (+)
CBA/J	MGP_CBAJ_G0005010	lincRNA gene	Chr10:20986100-20989239 (+)
DBA/2J	MGP_DBA2J_G0005029	lincRNA gene	Chr10:18681711-18684850 (+)
FVB/NJ	MGP_FVBNJ_G0005051	lincRNA gene	Chr10:18419199-18422338 (+)
LP/J	MGP_LPJ_G0005108	lincRNA gene	Chr10:19347720-19350859 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005034	lincRNA gene	Chr10:21151282-21154421 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005228	lincRNA gene	Chr10:19124664-19127803 (+)
PWK/PhJ	MGP_PWKPhJ_G0004918	lincRNA gene	Chr10:18582758-18585886 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004843	lincRNA gene	Chr10:19287071-19290203 (+)
WSB/EiJ	MGP_WSBEiJ_G0005014	lincRNA gene	Chr10:19216146-19219290 (+)

Homology

• Gene Tree
  Gm29323
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm29323
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000099749 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099749	Ensembl Gene Model | MGI Sequence Detail	3140	C57BL/6J
transcript	ENSMUST00000189792	Ensembl | MGI Sequence Detail	332	Not Applicable

References

• Summaries
  All 7

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87