Gm29371 Gene Detail

Summary

• Symbol
  Gm29371
• Name
  predicted gene 29371

• Feature Type
  lncRNA gene
• IDs
  MGI:5580077
  NCBI Gene: 102635830
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:87007893-87024140 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  373 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580077	lncRNA gene	Chr1:87007893-87025733 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004895	lincRNA gene	Chr1:88427984-88428746 (+)
A/J	MGP_AJ_G0004877	lincRNA gene	Chr1:85127581-85128343 (+)
AKR/J	MGP_AKRJ_G0004855	lincRNA gene	Chr1:87641030-87641792 (+)
BALB/cJ	MGP_BALBcJ_G0004858	lincRNA gene	Chr1:85247492-85248254 (+)
C3H/HeJ	MGP_C3HHeJ_G0004807	lincRNA gene	Chr1:87901174-87901936 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005009	lincRNA gene	Chr1:91778044-91778806 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004433	lincRNA gene	Chr1:79581016-79581785 (+)
CAST/EiJ	MGP_CASTEiJ_G0004758	lincRNA gene	Chr1:87104036-87104798 (+)
CBA/J	MGP_CBAJ_G0004799	lincRNA gene	Chr1:94638358-94639120 (+)
DBA/2J	MGP_DBA2J_G0004818	lincRNA gene	Chr1:84431466-84432228 (+)
FVB/NJ	MGP_FVBNJ_G0004838	lincRNA gene	Chr1:83494332-83495094 (+)
LP/J	MGP_LPJ_G0004896	lincRNA gene	Chr1:89497208-89497970 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004823	lincRNA gene	Chr1:97927059-97927821 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005013	lincRNA gene	Chr1:87742791-87743553 (+)
PWK/PhJ	MGP_PWKPhJ_G0004711	lincRNA gene	Chr1:83728761-83729523 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004636	lincRNA gene	Chr1:86670278-86671041 (+)
WSB/EiJ	MGP_WSBEiJ_G0004803	lincRNA gene	Chr1:87410355-87411117 (+)

Homology

• Gene Tree
  Gm29371
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm29371
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31
• RefSeq
  9

• Ensembl
  ENSMUSG00000101625 (Evidence)
• NCBI Gene
  102635830

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101625	Ensembl Gene Model | MGI Sequence Detail	16248	C57BL/6J
transcript	ENSMUST00000186823	Ensembl | MGI Sequence Detail	885	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45