Gm29441 Pseudogene Detail

Summary

• Symbol
  Gm29441
• Name
  predicted gene 29441

• Feature Type
  pseudogene
• IDs
  MGI:5580147
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:154907485-154907695 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580147	pseudogene	Chr1:154907485-154907695 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010398	pseudogene	Chr1:159929743-159929953 (+)
A/J	MGP_AJ_G0010388	pseudogene	Chr1:153510964-153511174 (+)
AKR/J	MGP_AKRJ_G0010357	pseudogene	Chr1:158231727-158231937 (+)
BALB/cJ	MGP_BALBcJ_G0010364	pseudogene	Chr1:154024364-154024574 (+)
C3H/HeJ	MGP_C3HHeJ_G0010296	pseudogene	Chr1:158356974-158357184 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010636	pseudogene	Chr1:165430014-165430224 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009316	pseudogene	Chr1:145735221-145735432 (+)
CAST/EiJ	MGP_CASTEiJ_G0010114	pseudogene	Chr1:157861581-157861792 (+)
CBA/J	MGP_CBAJ_G0010265	pseudogene	Chr1:171282509-171282719 (+)
DBA/2J	MGP_DBA2J_G0010297	pseudogene	Chr1:152487095-152487306 (+)
FVB/NJ	MGP_FVBNJ_G0010323	pseudogene	Chr1:150954168-150954378 (+)
LP/J	MGP_LPJ_G0010382	pseudogene	Chr1:161076628-161076839 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010279	pseudogene	Chr1:178864034-178864244 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010600	pseudogene	Chr1:158034845-158035055 (+)
PWK/PhJ	MGP_PWKPhJ_G0010017	pseudogene	Chr1:151552575-151552785 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009829	pseudogene	Chr1:156781902-156782114 (+)
WSB/EiJ	MGP_WSBEiJ_G0010184	pseudogene	Chr1:158097822-158098033 (+)

Homology

• Gene Tree
  Gm29441
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm29441
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000101433 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101433	Ensembl Gene Model | MGI Sequence Detail	211	C57BL/6J
transcript	ENSMUST00000191584	Ensembl | MGI Sequence Detail	211	Not Applicable

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;