Gm29462 Pseudogene Detail

Summary

• Symbol
  Gm29462
• Name
  predicted gene 29462

• Feature Type
  pseudogene
• IDs
  MGI:5580168
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:98194876-98195163 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580168	pseudogene	Chr1:98194876-98195163 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010253	pseudogene	Chr1:100048961-100049248 (+)
A/J	MGP_AJ_G0010247	pseudogene	Chr1:96546273-96546560 (+)
AKR/J	MGP_AKRJ_G0010218	pseudogene	Chr1:99344141-99344428 (+)
BALB/cJ	MGP_BALBcJ_G0010223	pseudogene	Chr1:96708982-96709269 (+)
C3H/HeJ	MGP_C3HHeJ_G0010161	pseudogene	Chr1:99619863-99620269 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010493	pseudogene	Chr1:104013860-104014147 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012278	pseudogene	Chr7:129239047-129239497 (-)
CAST/EiJ	MGP_CASTEiJ_G0009985	pseudogene	Chr1:98754557-98754832 (+)
CBA/J	MGP_CBAJ_G0010130	pseudogene	Chr1:107420438-107420725 (+)
DBA/2J	MGP_DBA2J_G0010162	pseudogene	Chr1:95751152-95751439 (+)
FVB/NJ	MGP_FVBNJ_G0010180	pseudogene	Chr1:94750218-94750505 (+)
LP/J	MGP_LPJ_G0010241	pseudogene	Chr1:101347150-101347437 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010141	pseudogene	Chr1:111128835-111129122 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010458	pseudogene	Chr1:99387541-99387828 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0013065	pseudogene	Chr7:117126551-117127020 (-)
WSB/EiJ	MGP_WSBEiJ_G0010050	pseudogene	Chr1:99189039-99189326 (+)

Homology

• Gene Tree
  Gm29462
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm29462
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000099634 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099634	Ensembl Gene Model | MGI Sequence Detail	288	C57BL/6J
transcript	ENSMUST00000191458	Ensembl | MGI Sequence Detail	288	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45