Gm29479 Pseudogene Detail

Summary

• Symbol
  Gm29479
• Name
  predicted gene 29479

• Feature Type
  pseudogene
• IDs
  MGI:5580185
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:47040364-47040818 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  183 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580185	pseudogene	Chr7:47040364-47040818 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040582	pseudogene	Chr7:47832248-47832702 (-)
A/J	MGP_AJ_G0040577	pseudogene	Chr7:46995118-46995572 (-)
AKR/J	MGP_AKRJ_G0040508	pseudogene	Chr7:48296165-48296619 (-)
BALB/cJ	MGP_BALBcJ_G0040570	pseudogene	Chr7:46840599-46841053 (-)
C3H/HeJ	MGP_C3HHeJ_G0040205	pseudogene	Chr7:48735778-48736232 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0041252	pseudogene	Chr7:50129216-50129670 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037448	pseudogene	Chr7:51168620-51169075 (-)
CAST/EiJ	MGP_CASTEiJ_G0039263	pseudogene	Chr7:40792212-40792667 (-)
CBA/J	MGP_CBAJ_G0040172	pseudogene	Chr7:51778557-51779011 (-)
DBA/2J	MGP_DBA2J_G0040385	pseudogene	Chr7:46491106-46491560 (-)
FVB/NJ	MGP_FVBNJ_G0040322	pseudogene	Chr7:47134852-47135307 (-)
LP/J	MGP_LPJ_G0040434	pseudogene	Chr7:49457988-49458443 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040318	pseudogene	Chr7:51740613-51741068 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041304	pseudogene	Chr7:47431825-47432279 (-)
PWK/PhJ	MGP_PWKPhJ_G0038931	pseudogene	Chr7:40604502-40604957 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038634	pseudogene	Chr7:35916484-35916939 (-)
WSB/EiJ	MGP_WSBEiJ_G0039515	pseudogene	Chr7:48742082-48742537 (-)

Homology

• Gene Tree
  Gm29479
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000100470 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100470	Ensembl Gene Model | MGI Sequence Detail	455	C57BL/6J
transcript	ENSMUST00000190352	Ensembl | MGI Sequence Detail	455	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;