Gm29485 Pseudogene Detail

Summary

• Symbol
  Gm29485
• Name
  predicted gene 29485

• Feature Type
  pseudogene
• IDs
  MGI:5580191
  NCBI Gene: 102634727
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:136451622-136451903 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580191	pseudogene	Chr1:136451622-136452537 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010354	pseudogene	Chr1:140360840-140361121 (+)
A/J	MGP_AJ_G0010341	pseudogene	Chr1:135032983-135033874 (+)
AKR/J	MGP_AKRJ_G0010311	pseudogene	Chr1:139045309-139045590 (+)
BALB/cJ	MGP_BALBcJ_G0010317	pseudogene	Chr1:135362797-135363164 (+)
C3H/HeJ	MGP_C3HHeJ_G0010250	pseudogene	Chr1:139149467-139151456 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010591	pseudogene	Chr1:145368578-145368859 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0010255	pseudogene	Chr1:134030580-134030861 (+)
FVB/NJ	MGP_FVBNJ_G0010278	pseudogene	Chr1:132675447-132675728 (+)
LP/J	MGP_LPJ_G0010339	pseudogene	Chr1:141571037-141571318 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010234	pseudogene	Chr1:156046995-156047276 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010553	pseudogene	Chr1:138813194-138813475 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm29485
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm29485
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16
• RefSeq
  1

• Ensembl
  ENSMUSG00000101413 (Evidence)
• NCBI Gene
  102634727

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101413	Ensembl Gene Model | MGI Sequence Detail	282	C57BL/6J
transcript	ENSMUST00000190220	Ensembl | MGI Sequence Detail	282	Not Applicable

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45