Gm29514 Gene Detail

Summary

• Symbol
  Gm29514
• Name
  predicted gene 29514

• Feature Type
  lncRNA gene
• IDs
  MGI:5580220
  NCBI Gene: 102639375
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:146302631-146370900 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  1954 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580220	lncRNA gene	Chr1:146295174-146370900 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0002757	antisense lncRNA gene	Chr1:150860965-150956608 (-)
A/J	MGP_AJ_G0002733	antisense lncRNA gene	Chr1:144808497-144881811 (-)
AKR/J	MGP_AKRJ_G0002714	antisense lncRNA gene	Chr1:149276227-149355814 (-)
BALB/cJ	MGP_BALBcJ_G0002720	antisense lncRNA gene	Chr1:145295338-145370374 (-)
C3H/HeJ	MGP_C3HHeJ_G0002678	antisense lncRNA gene	Chr1:149399531-149473766 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0002863	antisense lncRNA gene	Chr1:155964990-156050622 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002410	antisense lncRNA gene	Chr1:137458226-137514296 (-)
CAST/EiJ	MGP_CASTEiJ_G0002651	antisense lncRNA gene	Chr1:148830749-148905862 (-)
CBA/J	MGP_CBAJ_G0002674	antisense lncRNA gene	Chr1:161509353-161594443 (-)
DBA/2J	MGP_DBA2J_G0002680	antisense lncRNA gene	Chr1:143925734-143997922 (-)
FVB/NJ	MGP_FVBNJ_G0002700	antisense lncRNA gene	Chr1:142365226-142442063 (-)
LP/J	MGP_LPJ_G0002758	antisense lncRNA gene	Chr1:151853174-151923477 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002690	antisense lncRNA gene	Chr1:168369595-168497664 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002867	antisense lncRNA gene	Chr1:149012187-149081877 (-)
PWK/PhJ	MGP_PWKPhJ_G0002608	antisense lncRNA gene	Chr1:142806021-142869522 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0002559	antisense lncRNA gene	Chr1:147759336-147838268 (-)
WSB/EiJ	MGP_WSBEiJ_G0002680	antisense lncRNA gene	Chr1:149124265-149197004 (-)

Homology

• Gene Tree
  Gm29514
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Gene trapped
  1
• Genomic Mutations
  2 involving Gm29514
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  3

• Ensembl
  ENSMUSG00000099964 (Evidence)
• NCBI Gene
  102639375

Representative Sequences			Length	Strain/Species
genomic	102639375	NCBI Gene Model | MGI Sequence Detail	68270	C57BL/6J
transcript	NR_166158	RefSeq | MGI Sequence Detail	800	ZRU/MplStud

Molecular
Reagents

• All nucleic 3

  cDNA 3

References

• Summaries
  All 9

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;