Gm29530 Gene Detail

Summary

• Symbol
  Gm29530
• Name
  predicted gene 29530

• Feature Type
  lncRNA gene
• IDs
  MGI:5580236
  NCBI Gene: 102633413
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:83110166-83145648 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic

Strain
Comparison

• SNPs within 2kb
  1124 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580236	lncRNA gene	Chr12:83110166-83145648 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003150	antisense lncRNA gene	Chr12:83649671-83692543 (-)
A/J	MGP_AJ_G0003127	antisense lncRNA gene	Chr12:80499714-80536636 (-)
AKR/J	MGP_AKRJ_G0003107	antisense lncRNA gene	Chr12:82673797-82713115 (-)
BALB/cJ	MGP_BALBcJ_G0003114	antisense lncRNA gene	Chr12:80845016-80883929 (-)
C3H/HeJ	MGP_C3HHeJ_G0003070	antisense lncRNA gene	Chr12:83136451-83175733 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003257	antisense lncRNA gene	Chr12:86053590-86094571 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002791	antisense lncRNA gene	Chr12:77448327-77480884 (-)
CAST/EiJ	MGP_CASTEiJ_G0003039	antisense lncRNA gene	Chr12:78078992-78118486 (-)
CBA/J	MGP_CBAJ_G0003067	antisense lncRNA gene	Chr12:89349786-89398316 (-)
DBA/2J	MGP_DBA2J_G0003072	antisense lncRNA gene	Chr12:80062073-80099416 (-)
FVB/NJ	MGP_FVBNJ_G0003092	antisense lncRNA gene	Chr12:78996843-79032075 (-)
LP/J	MGP_LPJ_G0003147	antisense lncRNA gene	Chr12:83528337-83567122 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003081	antisense lncRNA gene	Chr12:92370185-92408162 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003261	antisense lncRNA gene	Chr12:82272762-82314432 (-)
PWK/PhJ	MGP_PWKPhJ_G0002997	antisense lncRNA gene	Chr12:74522270-74557943 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0002941	antisense lncRNA gene	Chr12:76741070-76775403 (-)
WSB/EiJ	MGP_WSBEiJ_G0003070	antisense lncRNA gene	Chr12:82921033-82961629 (-)

Homology

• Gene Tree
  Gm29530
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm29530
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000102029 (Evidence)
• NCBI Gene
  102633413

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102029	Ensembl Gene Model | MGI Sequence Detail	35483	C57BL/6J
transcript	ENSMUST00000187556	Ensembl | MGI Sequence Detail	1956	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;