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Gm29538 Gene Detail
Summary
  • Symbol
    Gm29538
  • Name
    predicted gene 29538
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5580244
    NCBI Gene: 102636980
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:88371691-88390341 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    573 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5580244
 lncRNA gene Chr1:88371691-88390342 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004897
 lincRNA gene Chr1:89868312-89887221 (-)
A/J MGP_AJ_G0004879
 lincRNA gene Chr1:86635327-86655395 (-)
AKR/J MGP_AKRJ_G0004857
 lincRNA gene Chr1:89191198-89211804 (-)
BALB/cJ MGP_BALBcJ_G0004860
 lincRNA gene Chr1:86777726-86796577 (-)
C3H/HeJ MGP_C3HHeJ_G0004809
 lincRNA gene Chr1:89416615-89436133 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005011
 lincRNA gene Chr1:93335739-93360051 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004435
 lincRNA gene Chr1:80939271-80957278 (-)
CAST/EiJ MGP_CASTEiJ_G0004760
 lincRNA gene Chr1:88695348-88717249 (-)
CBA/J MGP_CBAJ_G0004801
 lincRNA gene Chr1:96307572-96328356 (-)
DBA/2J MGP_DBA2J_G0004820
 lincRNA gene Chr1:85869584-85888297 (-)
FVB/NJ MGP_FVBNJ_G0004840
 lincRNA gene Chr1:84897320-84915965 (-)
LP/J MGP_LPJ_G0004898
 lincRNA gene Chr1:91006428-91026769 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004825
 lincRNA gene Chr1:99680127-99699942 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005015
 lincRNA gene Chr1:89233234-89252675 (-)
PWK/PhJ MGP_PWKPhJ_G0004713
 lincRNA gene Chr1:85255829-85277494 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004638
 lincRNA gene Chr1:88107532-88129343 (-)
WSB/EiJ MGP_WSBEiJ_G0004805
 lincRNA gene Chr1:88923053-88944440 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Gene trapped
    2
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm29538
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 102636980 NCBI Gene Model | MGI Sequence Detail 18651 C57BL/6J ±  kb
transcript NR_166083 RefSeq | MGI Sequence Detail 486 ZRU/MplStud  
For the selected sequence
References
more
  • Summaries
    All 9
    Phenotypes 5
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory