Gm29585 Gene Detail

Summary

• Symbol
  Gm29585
• Name
  predicted gene 29585

• Feature Type
  lncRNA gene
• IDs
  MGI:5580291
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:128358132-128381228 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic

Strain
Comparison

• SNPs within 2kb
  488 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580291	lncRNA gene	Chr10:128358132-128381228 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002912	antisense lncRNA gene	Chr10:132269304-132297423 (+)
A/J	MGP_AJ_G0002889	antisense lncRNA gene	Chr10:126955318-126981955 (+)
AKR/J	MGP_AKRJ_G0002870	antisense lncRNA gene	Chr10:130674498-130701052 (+)
BALB/cJ	MGP_BALBcJ_G0002877	antisense lncRNA gene	Chr10:127335955-127358792 (+)
C3H/HeJ	MGP_C3HHeJ_G0002833	antisense lncRNA gene	Chr10:130837041-130860976 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003020	antisense lncRNA gene	Chr10:136744658-136778501 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002562	antisense lncRNA gene	Chr10:120884309-120907333 (+)
CAST/EiJ	MGP_CASTEiJ_G0002805	antisense lncRNA gene	Chr10:131553323-131578202 (+)
CBA/J	MGP_CBAJ_G0002829	antisense lncRNA gene	Chr10:142317751-142340883 (+)
DBA/2J	MGP_DBA2J_G0002836	antisense lncRNA gene	Chr10:126018499-126042160 (+)
FVB/NJ	MGP_FVBNJ_G0002855	antisense lncRNA gene	Chr10:124941642-124965031 (+)
LP/J	MGP_LPJ_G0002912	antisense lncRNA gene	Chr10:132857989-132881202 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002844	antisense lncRNA gene	Chr10:144894408-144920390 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003023	antisense lncRNA gene	Chr10:130781880-130804970 (+)
PWK/PhJ	MGP_PWKPhJ_G0002763	antisense lncRNA gene	Chr10:126276097-126300986 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002711	antisense lncRNA gene	Chr10:129882966-129917784 (+)
WSB/EiJ	MGP_WSBEiJ_G0002834	antisense lncRNA gene	Chr10:130996370-131022326 (+)

Homology

• Gene Tree
  Gm29585
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  4
• Gene trapped
  4
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000100548 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100548	Ensembl Gene Model | MGI Sequence Detail	23097	C57BL/6J
transcript	ENSMUST00000188089	Ensembl | MGI Sequence Detail	835	Not Applicable

References

• Summaries
  All 5

  Phenotypes 3
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9