Gm29590 Gene Detail

Summary

• Symbol
  Gm29590
• Name
  predicted gene 29590

• Feature Type
  lncRNA gene
• IDs
  MGI:5580296
  NCBI Gene: 102632831
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:37692916-37696050 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic

Strain
Comparison

• SNPs within 2kb
  236 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580296	lncRNA gene	Chr13:37692618-37696397 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005449	lincRNA gene	Chr13:35776450-35779580 (+)
A/J	MGP_AJ_G0005435	lincRNA gene	Chr13:34671431-34674660 (+)
AKR/J	MGP_AKRJ_G0005414	lincRNA gene	Chr13:35583661-35586820 (+)
BALB/cJ	MGP_BALBcJ_G0005416	lincRNA gene	Chr13:34772441-34775636 (+)
C3H/HeJ	MGP_C3HHeJ_G0005364	lincRNA gene	Chr13:35413207-35417051 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005571	lincRNA gene	Chr13:36967059-36971217 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004948	lincRNA gene	Chr13:32853442-32856550 (+)
CAST/EiJ	MGP_CASTEiJ_G0005307	lincRNA gene	Chr13:35146952-35151553 (+)
CBA/J	MGP_CBAJ_G0005353	lincRNA gene	Chr13:38541302-38544412 (+)
DBA/2J	MGP_DBA2J_G0005369	lincRNA gene	Chr13:34198014-34201142 (+)
FVB/NJ	MGP_FVBNJ_G0005395	lincRNA gene	Chr13:33729604-33732757 (+)
LP/J	MGP_LPJ_G0005452	lincRNA gene	Chr13:36033224-36036329 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005378	lincRNA gene	Chr13:38682644-38685782 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005571	lincRNA gene	Chr13:35142430-35147214 (+)
PWK/PhJ	MGP_PWKPhJ_G0005256	lincRNA gene	Chr13:34303443-34308185 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005177	lincRNA gene	Chr13:33815729-33818891 (+)
WSB/EiJ	MGP_WSBEiJ_G0005356	lincRNA gene	Chr13:35495404-35499734 (+)

Homology

• Gene Tree
  Gm29590
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm29590
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1

• Ensembl
  ENSMUSG00000100022 (Evidence)
• NCBI Gene
  102632831

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100022	Ensembl Gene Model | MGI Sequence Detail	3135	C57BL/6J
transcript	ENSMUST00000190396	Ensembl | MGI Sequence Detail	1304	Not Applicable

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69