Gm29596 Pseudogene Detail

Summary

• Symbol
  Gm29596
• Name
  predicted gene 29596

• Feature Type
  pseudogene
• IDs
  MGI:5580302
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:59712400-59712784 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  81 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580302	pseudogene	Chr1:59712400-59712784 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010156	pseudogene	Chr1:59652755-59653139 (+)
A/J	MGP_AJ_G0010143	pseudogene	Chr1:57578500-57578884 (+)
AKR/J	MGP_AKRJ_G0010120	pseudogene	Chr1:59193463-59193847 (+)
BALB/cJ	MGP_BALBcJ_G0010129	pseudogene	Chr1:57607483-57607867 (+)
C3H/HeJ	MGP_C3HHeJ_G0010062	pseudogene	Chr1:59435081-59435465 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010380	pseudogene	Chr1:62002901-62003285 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009126	pseudogene	Chr1:53386395-53386769 (+)
CAST/EiJ	MGP_CASTEiJ_G0009895	pseudogene	Chr1:58613261-58613645 (+)
CBA/J	MGP_CBAJ_G0010031	pseudogene	Chr1:63935593-63935977 (+)
DBA/2J	MGP_DBA2J_G0010058	pseudogene	Chr1:57006240-57006624 (+)
FVB/NJ	MGP_FVBNJ_G0010081	pseudogene	Chr1:56307947-56308331 (+)
LP/J	MGP_LPJ_G0010144	pseudogene	Chr1:60545851-60546235 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010042	pseudogene	Chr1:66855354-66855738 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010357	pseudogene	Chr1:59096469-59096853 (+)
PWK/PhJ	MGP_PWKPhJ_G0009800	pseudogene	Chr1:56342255-56342639 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009613	pseudogene	Chr1:58637546-58637928 (+)
WSB/EiJ	MGP_WSBEiJ_G0009960	pseudogene	Chr1:58804374-58804758 (+)

Homology

• Gene Tree
  Gm29596
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm29596
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000101400 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101400	Ensembl Gene Model | MGI Sequence Detail	385	C57BL/6J
transcript	ENSMUST00000185710	Ensembl | MGI Sequence Detail	385	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45