Gm29600 Pseudogene Detail

Summary

• Symbol
  Gm29600
• Name
  predicted gene 29600

• Feature Type
  pseudogene
• IDs
  MGI:5580306
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:103286368-103286744 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic

Strain
Comparison

• SNPs within 2kb
  136 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580306	pseudogene	Chr9:103286368-103286744 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014244	pseudogene	Chr9:105035731-105036107 (+)
A/J	MGP_AJ_G0014260	pseudogene	Chr9:101249866-101250242 (+)
AKR/J	MGP_AKRJ_G0014185	pseudogene	Chr9:103762899-103763275 (+)
BALB/cJ	MGP_BALBcJ_G0014210	pseudogene	Chr9:100958228-100958604 (+)
C3H/HeJ	MGP_C3HHeJ_G0014041	pseudogene	Chr9:104149584-104149960 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014663	pseudogene	Chr9:107952136-107952512 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012473	pseudogene	Chr9:98829051-98829427 (+)
CAST/EiJ	MGP_CASTEiJ_G0013695	pseudogene	Chr9:104003480-104003856 (+)
CBA/J	MGP_CBAJ_G0014022	pseudogene	Chr9:111715252-111715628 (+)
DBA/2J	MGP_DBA2J_G0014107	pseudogene	Chr9:100738875-100739251 (+)
FVB/NJ	MGP_FVBNJ_G0014106	pseudogene	Chr9:99544661-99545037 (+)
LP/J	MGP_LPJ_G0014198	pseudogene	Chr9:105238153-105238529 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014141	pseudogene	Chr9:113507645-113508021 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014634	pseudogene	Chr9:104004639-104005016 (+)
PWK/PhJ	MGP_PWKPhJ_G0013509	pseudogene	Chr9:101001168-101001544 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013299	pseudogene	Chr9:104053618-104053994 (+)
WSB/EiJ	MGP_WSBEiJ_G0013756	pseudogene	Chr9:103887706-103888082 (+)

Homology

• Gene Tree
  Gm29600
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000101419 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101419	Ensembl Gene Model | MGI Sequence Detail	377	C57BL/6J
transcript	ENSMUST00000188687	Ensembl | MGI Sequence Detail	377	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;