Gm29649 Pseudogene Detail

Summary

• Symbol
  Gm29649
• Name
  predicted gene 29649

• Feature Type
  pseudogene
• IDs
  MGI:5580355
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:16828429-16828847 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580355	pseudogene	Chr1:16828429-16828847 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010010	pseudogene	Chr1:14279484-14279902 (-)
A/J	MGP_AJ_G0009991	pseudogene	Chr1:14083353-14083770 (-)
AKR/J	MGP_AKRJ_G0009974	pseudogene	Chr1:14116214-14116632 (-)
BALB/cJ	MGP_BALBcJ_G0009980	pseudogene	Chr1:13816886-13817303 (-)
C3H/HeJ	MGP_C3HHeJ_G0009911	pseudogene	Chr1:14144093-14144510 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010229	pseudogene	Chr1:14899293-14899711 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009008	pseudogene	Chr1:12679846-12680269 (-)
CAST/EiJ	MGP_CASTEiJ_G0009760	pseudogene	Chr1:14222903-14223334 (-)
CBA/J	MGP_CBAJ_G0009885	pseudogene	Chr1:15241012-15241429 (-)
DBA/2J	MGP_DBA2J_G0009907	pseudogene	Chr1:13692525-13692942 (-)
FVB/NJ	MGP_FVBNJ_G0009933	pseudogene	Chr1:13465473-13465890 (-)
LP/J	MGP_LPJ_G0010001	pseudogene	Chr1:14483869-14484287 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0009893	pseudogene	Chr1:15845728-15846145 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010204	pseudogene	Chr1:14068654-14069071 (-)
PWK/PhJ	MGP_PWKPhJ_G0009664	pseudogene	Chr1:13459809-13460226 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009482	pseudogene	Chr1:14269559-14269980 (-)
WSB/EiJ	MGP_WSBEiJ_G0009821	pseudogene	Chr1:14010450-14010868 (-)

Homology

• Gene Tree
  Gm29649
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000100093 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100093	Ensembl Gene Model | MGI Sequence Detail	419	C57BL/6J
transcript	ENSMUST00000185649	Ensembl | MGI Sequence Detail	419	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;