Gm29811 Gene Detail

Summary

• Symbol
  Gm29811
• Name
  predicted gene, 29811

• Feature Type
  lncRNA gene
• IDs
  MGI:5588970
  NCBI Gene: 101243624
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:132547963-132584357 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1340 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5588970	lncRNA gene	Chr3:132547963-132584357 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0006312	lincRNA gene	Chr3:135625617-135661746 (-)
A/J	MGP_AJ_G0006305	lincRNA gene	Chr3:130840512-130877289 (-)
AKR/J	MGP_AKRJ_G0006281	lincRNA gene	Chr3:134252323-134294886 (-)
BALB/cJ	MGP_BALBcJ_G0006279	lincRNA gene	Chr3:130671014-130711904 (-)
C3H/HeJ	MGP_C3HHeJ_G0006231	lincRNA gene	Chr3:134643567-134684694 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0006444	lincRNA gene	Chr3:140383938-140420203 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005739	lincRNA gene	Chr3:126272291-126310130 (-)
CAST/EiJ	MGP_CASTEiJ_G0006164	lincRNA gene	Chr3:134395258-134431912 (-)
CBA/J	MGP_CBAJ_G0006214	lincRNA gene	Chr3:145123504-145164680 (-)
DBA/2J	MGP_DBA2J_G0006236	lincRNA gene	Chr3:130005682-130042005 (-)
FVB/NJ	MGP_FVBNJ_G0006257	lincRNA gene	Chr3:127581112-127617238 (-)
LP/J	MGP_LPJ_G0006317	lincRNA gene	Chr3:137104595-137141433 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006247	lincRNA gene	Chr3:153092145-153129965 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0006450	lincRNA gene	Chr3:133922058-133960436 (-)
PWK/PhJ	MGP_PWKPhJ_G0006101	lincRNA gene	Chr3:129772609-129816714 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0006015	lincRNA gene	Chr3:131991125-132030538 (-)
WSB/EiJ	MGP_WSBEiJ_G0006211	lincRNA gene	Chr3:134681640-134718917 (-)

Homology

• Gene Tree
  Gm29811
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm29811
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  2

• Ensembl
  ENSMUSG00000106230 (Evidence)
• NCBI Gene
  101243624

Representative Sequences			Length	Strain/Species
genomic	101243624	NCBI Gene Model | MGI Sequence Detail	36395	C57BL/6J
transcript	NR_102297	RefSeq | MGI Sequence Detail	1671	ZRU/MplStud

Molecular
Reagents

• All nucleic 3

  cDNA 3

References

• Summaries
  All 8

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gm29811:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr35735	Chr3:132563211-132563218 (-)	21,142 bp