Gm29815 Pseudogene Detail

Summary

• Symbol
  Gm29815
• Name
  predicted gene, 29815

• Feature Type
  pseudogene
• IDs
  MGI:5588974
  NCBI Gene: 102238519
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:148550277-148550454 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5588974	pseudogene	Chr5:148550055-148550519 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013328	pseudogene	Chr5:154361908-154362085 (-)
A/J	MGP_AJ_G0013310	pseudogene	Chr5:147783206-147783383 (-)
AKR/J	MGP_AKRJ_G0013272	pseudogene	Chr5:152352898-152353075 (-)
BALB/cJ	MGP_BALBcJ_G0013288	pseudogene	Chr5:149032410-149032587 (-)
C3H/HeJ	MGP_C3HHeJ_G0013136	pseudogene	Chr5:153315481-153315658 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0013657	pseudogene	Chr5:160044230-160044407 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011789	pseudogene	Chr5:142186475-142186652 (-)
CAST/EiJ	MGP_CASTEiJ_G0012855	pseudogene	Chr5:152907519-152907696 (-)
CBA/J	MGP_CBAJ_G0013105	pseudogene	Chr5:166720599-166720776 (-)
DBA/2J	MGP_DBA2J_G0013190	pseudogene	Chr5:147465504-147465681 (-)
FVB/NJ	MGP_FVBNJ_G0013186	pseudogene	Chr5:146690451-146690628 (-)
LP/J	MGP_LPJ_G0013258	pseudogene	Chr5:155055921-155056098 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013205	pseudogene	Chr5:168920058-168920235 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013660	pseudogene	Chr5:152279464-152279641 (-)
PWK/PhJ	MGP_PWKPhJ_G0012668	pseudogene	Chr5:146599298-146599475 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012453	pseudogene	Chr5:149570830-149571007 (-)
WSB/EiJ	MGP_WSBEiJ_G0012895	pseudogene	Chr5:153088702-153088879 (-)

Homology

• Gene Tree
  Gm29815
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000107098 (Evidence)
• NCBI Gene
  102238519

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107098	Ensembl Gene Model | MGI Sequence Detail	178	C57BL/6J
transcript	ENSMUST00000202418	Ensembl | MGI Sequence Detail	178	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;