Gm29856 Gene Detail

Summary

• Symbol
  Gm29856
• Name
  predicted gene, 29856

• Feature Type
  lncRNA gene
• IDs
  MGI:5589015
  NCBI Gene: 102631545
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:177286532-177288770 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  74 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589015	lncRNA gene	Chr1:177286532-177288770 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015127	unclassified non-coding RNA gene	Chr1:183637679-183641482 (+)
A/J	MGP_AJ_G0015101	unclassified non-coding RNA gene	Chr1:176234210-176236454 (+)
AKR/J	MGP_AKRJ_G0015064	unclassified non-coding RNA gene	Chr1:181510615-181512777 (+)
BALB/cJ	MGP_BALBcJ_G0015064	unclassified non-coding RNA gene	Chr1:176768269-176770481 (+)
C3H/HeJ	MGP_C3HHeJ_G0014887	unclassified non-coding RNA gene	Chr1:182112015-182114338 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015520	unclassified non-coding RNA gene	Chr1:189665684-189667847 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013266	unclassified non-coding RNA gene	Chr1:167513143-167515370 (+)
CAST/EiJ	MGP_CASTEiJ_G0014441	unclassified non-coding RNA gene	Chr1:181501467-181504368 (+)
CBA/J	MGP_CBAJ_G0014866	unclassified non-coding RNA gene	Chr1:196576018-196578180 (+)
DBA/2J	MGP_DBA2J_G0014959	unclassified non-coding RNA gene	Chr1:175095499-175097749 (+)
FVB/NJ	MGP_FVBNJ_G0014970	unclassified non-coding RNA gene	Chr1:173187514-173189858 (+)
LP/J	MGP_LPJ_G0015041	unclassified non-coding RNA gene	Chr1:184825215-184827713 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014997	unclassified non-coding RNA gene	Chr1:203820172-203822361 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015559	unclassified non-coding RNA gene	Chr1:181251140-181255024 (+)
PWK/PhJ	MGP_PWKPhJ_G0014233	unclassified non-coding RNA gene	Chr1:174186281-174188526 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014021	unclassified non-coding RNA gene	Chr1:180351255-180353461 (+)
WSB/EiJ	MGP_WSBEiJ_G0014544	unclassified non-coding RNA gene	Chr1:181459945-181462100 (+)

Homology

• Gene Tree
  Gm29856
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm29856
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000102432 (Evidence)
• NCBI Gene
  102631545

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102432	Ensembl Gene Model | MGI Sequence Detail	2239	C57BL/6J
transcript	ENSMUST00000191905	Ensembl | MGI Sequence Detail	1257	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;