Gm29933 Gene Detail

Summary

• Symbol
  Gm29933
• Name
  predicted gene, 29933

• Feature Type
  lncRNA gene
• IDs
  MGI:5589092
  NCBI Gene: 102631646
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr11:95686054-95699430 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  486 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589092	lncRNA gene	Chr11:95686054-95699430 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  4
• Gene trapped
  3
• Targeted
  1
• Genomic Mutations
  1 involving Gm29933
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  9
• RefSeq
  7

• NCBI Gene
  102631646

Representative Sequences			Length	Strain/Species
genomic	102631646	NCBI Gene Model | MGI Sequence Detail	13377	C57BL/6J
transcript	XR_880169	RefSeq | MGI Sequence Detail	2377	C57BL/6J

References

• Summaries
  All 9

  Phenotypes 7
• Earliest
  J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52

TSS for Gm29933:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr110281	Chr11:95699422-95699445 (-)	-4 bp
Tssr110280	Chr11:95690640-95690642 (-)	8,789 bp