Gm30498 Gene Detail

Summary

• Symbol
  Gm30498
• Name
  predicted gene, 30498

• Feature Type
  lncRNA gene
• IDs
  MGI:5589657
  NCBI Gene: 102632423
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:118277129-118285345 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  379 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5589657	lncRNA gene	Chr6:118277128-118285680 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0007056	lincRNA gene	Chr6:121040999-121049123 (-)
A/J	MGP_AJ_G0007052	lincRNA gene	Chr6:116412123-116420339 (-)
AKR/J	MGP_AKRJ_G0007021	lincRNA gene	Chr6:119530696-119538823 (-)
BALB/cJ	MGP_BALBcJ_G0007027	lincRNA gene	Chr6:116187060-116195505 (-)
C3H/HeJ	MGP_C3HHeJ_G0006896	lincRNA gene	Chr6:64753507-64761687 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007193	lincRNA gene	Chr6:124155748-124163970 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006421	lincRNA gene	Chr6:113334258-113343750 (-)
CAST/EiJ	MGP_CASTEiJ_G0006883	lincRNA gene	Chr6:119933840-119943062 (-)
CBA/J	MGP_CBAJ_G0006952	lincRNA gene	Chr6:129043257-129051451 (-)
DBA/2J	MGP_DBA2J_G0006974	lincRNA gene	Chr6:115311201-115319325 (-)
FVB/NJ	MGP_FVBNJ_G0006998	lincRNA gene	Chr6:114443281-114451445 (-)
LP/J	MGP_LPJ_G0007059	lincRNA gene	Chr6:121077519-121085647 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006978	lincRNA gene	Chr6:133140212-133148336 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007198	lincRNA gene	Chr6:119564754-119572966 (-)
PWK/PhJ	MGP_PWKPhJ_G0006823	lincRNA gene	Chr6:114325184-114334538 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0006733	lincRNA gene	Chr6:118278773-118287875 (-)
WSB/EiJ	MGP_WSBEiJ_G0006941	lincRNA gene	Chr6:119835296-119844726 (-)

Homology

• Gene Tree
  Gm30498
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000107933 (Evidence)
• NCBI Gene
  102632423

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107933	Ensembl Gene Model | MGI Sequence Detail	8217	C57BL/6J
transcript	ENSMUST00000204033	Ensembl | MGI Sequence Detail	615	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;