Gm31121 Gene Detail

Summary

• Symbol
  Gm31121
• Name
  predicted gene, 31121

• Feature Type
  lncRNA gene
• IDs
  MGI:5590280
  NCBI Gene: 102633249
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:149268519-149366031 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2621 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590280	lncRNA gene	Chr3:149268519-149366033 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0006363	lincRNA gene	Chr3:153214996-153324639 (-)
A/J	MGP_AJ_G0006356	lincRNA gene	Chr3:147699745-147804095 (-)
AKR/J	MGP_AKRJ_G0006331	lincRNA gene	Chr3:151657612-151769844 (-)
BALB/cJ	MGP_BALBcJ_G0006330	lincRNA gene	Chr3:147541861-147641233 (-)
C3H/HeJ	MGP_C3HHeJ_G0006281	lincRNA gene	Chr3:152018825-152127575 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0006495	lincRNA gene	Chr3:158342003-158449011 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005790	lincRNA gene	Chr3:142653081-142752063 (-)
CAST/EiJ	MGP_CASTEiJ_G0006215	lincRNA gene	Chr3:152025571-152128040 (-)
CBA/J	MGP_CBAJ_G0006264	lincRNA gene	Chr3:163909742-164025774 (-)
DBA/2J	MGP_DBA2J_G0006285	lincRNA gene	Chr3:146833242-146936664 (-)
FVB/NJ	MGP_FVBNJ_G0006307	lincRNA gene	Chr3:144232692-144334015 (-)
LP/J	MGP_LPJ_G0006367	lincRNA gene	Chr3:154580358-154684774 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006297	lincRNA gene	Chr3:172249547-172359320 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0006501	lincRNA gene	Chr3:151254308-151371274 (-)
PWK/PhJ	MGP_PWKPhJ_G0006152	lincRNA gene	Chr3:146721862-146830309 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0006065	lincRNA gene	Chr3:149425416-149517780 (-)
WSB/EiJ	MGP_WSBEiJ_G0006261	lincRNA gene	Chr3:152238801-152341924 (-)

Homology

• Gene Tree
  Gm31121
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000104785 (Evidence)
• NCBI Gene
  102633249

Representative Sequences			Length	Strain/Species
genomic	102633249	NCBI Gene Model | MGI Sequence Detail	97513	C57BL/6J
transcript	AK139864	GenBank | ENA | DDBJ | MGI Sequence Detail	1416	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;