Gm31520 Pseudogene Detail

Summary

• Symbol
  Gm31520
• Name
  predicted gene, 31520

• Feature Type
  pseudogene
• IDs
  MGI:5590679
  NCBI Gene: 102633773
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:66260491-66261223 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  163 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5590679	pseudogene	Chr6:66249489-66261829 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039738	pseudogene	Chr6:66206384-66231288 (+)
A/J	MGP_AJ_G0039740	pseudogene	Chr6:63336773-63357832 (+)
AKR/J	MGP_AKRJ_G0039664	pseudogene	Chr6:65316723-65337415 (+)
BALB/cJ	MGP_BALBcJ_G0039708	pseudogene	Chr6:63728872-63750229 (+)
C3H/HeJ	MGP_C3HHeJ_G0039371	pseudogene	Chr6:118855370-118877245 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040270	pseudogene	Chr6:67776878-67800026 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036897	pseudogene	Chr6:60590594-60612880 (+)
CAST/EiJ	MGP_CASTEiJ_G0038488	pseudogene	Chr6:65612951-65647776 (+)
CBA/J	MGP_CBAJ_G0039342	pseudogene	Chr6:70574690-70597888 (+)
DBA/2J	MGP_DBA2J_G0039535	pseudogene	Chr6:63016571-63037534 (+)
FVB/NJ	MGP_FVBNJ_G0039493	pseudogene	Chr6:62530933-62554519 (+)
LP/J	MGP_LPJ_G0039573	pseudogene	Chr6:66112284-66135257 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039495	pseudogene	Chr6:74276782-74301120 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040371	pseudogene	Chr6:65281111-65301769 (+)
PWK/PhJ	MGP_PWKPhJ_G0038162	pseudogene	Chr6:62164806-62185419 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037910	pseudogene	Chr6:64821490-64850863 (+)
WSB/EiJ	MGP_WSBEiJ_G0038722	pseudogene	Chr6:65571885-65594883 (+)

Homology

• Gene Tree
  Gm31520
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000107653 (Evidence)
• NCBI Gene
  102633773

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107653	Ensembl Gene Model | MGI Sequence Detail	733	C57BL/6J
transcript	ENSMUST00000203048	Ensembl | MGI Sequence Detail	733	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;